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Q9PY94 (NSP1_ROTHC) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Non-structural protein 1

Short name=NSP1
Alternative name(s):
NCVP2
Non-structural RNA-binding protein 53
Short name=NS53
OrganismRotavirus C (isolate Human/United Kingdom/Bristol/1989) (RV-C) [Reference proteome]
Taxonomic identifier31567 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the rotavirus C NSP1 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 394394Non-structural protein 1
PRO_0000369881

Regions

Zinc finger40 – 6930 Potential

Sequences

Sequence LengthMass (Da)Tools
Q9PY94 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 4FAB1BB841EDCF29

FASTA39446,642
        10         20         30         40         50         60 
MANSFREMLY WYRKIIDRKL PCVNVNIWRR EIAYKANGIC LNCLNECKVC PCDYCGIRHK 

        70         80         90        100        110        120 
CENCLNSDCF MNTNNEFNSH RWITFDEEPS QMVLFEYWIM YKDYFLSKFN YNYKAQLKIL 

       130        140        150        160        170        180 
NMNKNRRFHI NESKKKALSV PITSQYLKFK FNNKIYIMFG TFLTSKIQPW IQLKSLKVGY 

       190        200        210        220        230        240 
IQSLNVDRCA KLIATKGMFA TNSFKSSCIT EINARRPISE CDYLIEACLC NENNEWKFSA 

       250        260        270        280        290        300 
VMGRDKIPVT KSLAMKYFCK NINTELFYYG HSKCHVVSEC PRWNQQLRVL NASTLNIIFR 

       310        320        330        340        350        360 
RQFMNEVVEW FENFTQLTGM HYDFIKTCVY NKVIISHFRK EIEDYINSGK KISLSSVIPD 

       370        380        390 
GHALYTNIDI LRISLMLAID VALNRIESQQ MDVL 

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References

[1]"Molecular characterization of human group C rotavirus genes 6, 7 and 9."
James V.L., Lambden P.R., Deng Y., Caul E.O., Clarke I.N.
J. Gen. Virol. 80:3181-3187(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ132204 Genomic RNA. Translation: CAB52752.1.
RefSeqYP_392487.1. NC_007544.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3773134.

Family and domain databases

InterProIPR002148. Rotavirus_NSP1.
[Graphical view]
PfamPF00981. Rota_NS53. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameNSP1_ROTHC
AccessionPrimary (citable) accession number: Q9PY94
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 1, 2000
Last modified: February 19, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families