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Protein
Submitted name:

Kv3.1 potassium channel

Gene

kcnc1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIon channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation
Biological processIon transport, Potassium transport, Transport
LigandPotassium

Names & Taxonomyi

Protein namesi
Submitted name:
Kv3.1 potassium channelImported
Gene namesi
Name:kcnc1Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6252890. kcnc1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei169 – 188HelicalSequence analysisAdd BLAST20
Transmembranei225 – 247HelicalSequence analysisAdd BLAST23
Transmembranei259 – 279HelicalSequence analysisAdd BLAST21
Transmembranei326 – 347HelicalSequence analysisAdd BLAST22
Transmembranei368 – 385HelicalSequence analysisAdd BLAST18
Transmembranei397 – 426HelicalSequence analysisAdd BLAST30

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ9PVD1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 112BTBInterPro annotationAdd BLAST105

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG105862.

Family and domain databases

InterProiView protein in InterPro
IPR000210. BTB/POZ_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003974. K_chnl_volt-dep_Kv3.
IPR011333. SKP1/BTB/POZ_sf.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
PANTHERiPTHR11537. PTHR11537. 2 hits.
PfamiView protein in Pfam
PF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
PRINTSiPR00169. KCHANNEL.
PR01491. KVCHANNEL.
PR01498. SHAWCHANNEL.
SMARTiView protein in SMART
SM00225. BTB. 1 hit.
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9PVD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKNEDSDKI VINVGGIRHE TYRSTPKTLP GTRLSWLTEP DAFSNFDYDP
60 70 80 90 100
KTDEFFFDRH PQVFACVLNY YRTGKLHCPS DVCGPLYEEE LAFWGIDETD
110 120 130 140 150
VEACCWMNYR QHRDAEEALD SFETPEPEEE EDGDLKRLCL QEDGRKLGWW
160 170 180 190 200
KRLRPKVWAL FEDPYSSKYA RYIALASLFF ILISITTFCL ETHEAFNDVN
210 220 230 240 250
NKTEVFTQGN ITKTETILEM ETAPFLNYVE GICVIWFTFE FLIRVIFCPD
260 270 280 290 300
KMEFIKSSLN IIDFVAILPF YLEIGLSGLS SKAAKDVLGF LRVVRFVRIL
310 320 330 340 350
RIFKLTRHFV GLRVLGHTLR ASTNEFLLLI IFLALGVLIF ATMIYYAERI
360 370 380 390 400
GADPDDITGS KHTYFKNIPI GFWWAVVTMT TLGYGDMYPM TWSGMLVGAL
410 420 430 440 450
CALAGVLTIA MPVPVIVNNF GMYYSLAMAK QKLPKKKNKH IPRPPLPGSP
460 470 480 490 500
NYCKPDLQSP HRSAQGDACP LAQEEIIEIN RADSKQNGDA ANAALANEDC
510 520 530 540 550
PTIDQALSPE EKSPITPGGR ERYNRDRACF LLTTGDFAHS PDGNIRKGYE
560 570 580 590
KSRSLNSIAG MSGNMLRLSP ISTPFGSPSA VRRPRSPIPS IL
Length:592
Mass (Da):66,892
Last modified:May 1, 2000 - v1
Checksum:i882F4A230BBDD8E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132853 mRNA. Translation: AAD52813.1.
RefSeqiNP_001079081.1. NM_001085612.2.
UniGeneiXl.49026.

Genome annotation databases

GeneIDi373613.

Similar proteinsi

Entry informationi

Entry nameiQ9PVD1_XENLA
AccessioniPrimary (citable) accession number: Q9PVD1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: November 22, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)