Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Kv3.1 potassium channel

Gene

kcnc1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation

Keywords - Biological processi

Ion transport, Potassium transport, Transport

Keywords - Ligandi

Potassium

Names & Taxonomyi

Protein namesi
Submitted name:
Kv3.1 potassium channelImported
Gene namesi
Name:kcnc1Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6252890. kcnc1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei169 – 18820HelicalSequence analysisAdd
BLAST
Transmembranei225 – 24723HelicalSequence analysisAdd
BLAST
Transmembranei259 – 27921HelicalSequence analysisAdd
BLAST
Transmembranei326 – 34722HelicalSequence analysisAdd
BLAST
Transmembranei368 – 38518HelicalSequence analysisAdd
BLAST
Transmembranei397 – 42630HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ9PVD1.
SMRiQ9PVD1. Positions 8-113.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 112105BTB (POZ)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG105862.
KOiK04887.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR000210. BTB/POZ_dom.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003974. K_chnl_volt-dep_Kv3.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01491. KVCHANNEL.
PR01498. SHAWCHANNEL.
SMARTiSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9PVD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKNEDSDKI VINVGGIRHE TYRSTPKTLP GTRLSWLTEP DAFSNFDYDP
60 70 80 90 100
KTDEFFFDRH PQVFACVLNY YRTGKLHCPS DVCGPLYEEE LAFWGIDETD
110 120 130 140 150
VEACCWMNYR QHRDAEEALD SFETPEPEEE EDGDLKRLCL QEDGRKLGWW
160 170 180 190 200
KRLRPKVWAL FEDPYSSKYA RYIALASLFF ILISITTFCL ETHEAFNDVN
210 220 230 240 250
NKTEVFTQGN ITKTETILEM ETAPFLNYVE GICVIWFTFE FLIRVIFCPD
260 270 280 290 300
KMEFIKSSLN IIDFVAILPF YLEIGLSGLS SKAAKDVLGF LRVVRFVRIL
310 320 330 340 350
RIFKLTRHFV GLRVLGHTLR ASTNEFLLLI IFLALGVLIF ATMIYYAERI
360 370 380 390 400
GADPDDITGS KHTYFKNIPI GFWWAVVTMT TLGYGDMYPM TWSGMLVGAL
410 420 430 440 450
CALAGVLTIA MPVPVIVNNF GMYYSLAMAK QKLPKKKNKH IPRPPLPGSP
460 470 480 490 500
NYCKPDLQSP HRSAQGDACP LAQEEIIEIN RADSKQNGDA ANAALANEDC
510 520 530 540 550
PTIDQALSPE EKSPITPGGR ERYNRDRACF LLTTGDFAHS PDGNIRKGYE
560 570 580 590
KSRSLNSIAG MSGNMLRLSP ISTPFGSPSA VRRPRSPIPS IL
Length:592
Mass (Da):66,892
Last modified:May 1, 2000 - v1
Checksum:i882F4A230BBDD8E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132853 mRNA. Translation: AAD52813.1.
RefSeqiNP_001079081.1. NM_001085612.1.
UniGeneiXl.49026.

Genome annotation databases

GeneIDi373613.
KEGGixla:373613.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF132853 mRNA. Translation: AAD52813.1.
RefSeqiNP_001079081.1. NM_001085612.1.
UniGeneiXl.49026.

3D structure databases

ProteinModelPortaliQ9PVD1.
SMRiQ9PVD1. Positions 8-113.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi373613.
KEGGixla:373613.

Organism-specific databases

CTDi3746.
XenbaseiXB-GENE-6252890. kcnc1.

Phylogenomic databases

HOVERGENiHBG105862.
KOiK04887.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR000210. BTB/POZ_dom.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003974. K_chnl_volt-dep_Kv3.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01491. KVCHANNEL.
PR01498. SHAWCHANNEL.
SMARTiSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9PVD1_XENLA
AccessioniPrimary (citable) accession number: Q9PVD1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.