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Protein

Protein NipSnap homolog 2

Gene

nipsnap2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NipSnap homolog 2
Short name:
NipSnap2
Alternative name(s):
Glioblastoma-amplified sequence
Gene namesi
Name:nipsnap2
Synonyms:gbas
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 15

Organism-specific databases

ZFINiZDB-GENE-991008-18 nipsnap2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002211501 – 286Protein NipSnap homolog 2Add BLAST286

Proteomic databases

PaxDbiQ9PU58
PRIDEiQ9PU58

Expressioni

Gene expression databases

BgeeiENSDARG00000007264

Interactioni

Protein-protein interaction databases

IntActiQ9PU58, 1 interactor
MINTiQ9PU58
STRINGi7955.ENSDARP00000106906

Structurei

3D structure databases

ProteinModelPortaliQ9PU58
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NipSnap family.Curated

Phylogenomic databases

eggNOGiKOG2883 Eukaryota
ENOG410XSWP LUCA
GeneTreeiENSGT00730000110910
HOGENOMiHOG000194298
HOVERGENiHBG052627
InParanoidiQ9PU58
OMAiIMIPLKT
OrthoDBiEOG091G0G3J
PhylomeDBiQ9PU58
TreeFamiTF314501

Family and domain databases

InterProiView protein in InterPro
IPR011008 Dimeric_a/b-barrel
IPR012577 NIPSNAP
PfamiView protein in Pfam
PF07978 NIPSNAP, 1 hit
SUPFAMiSSF54909 SSF54909, 2 hits

Sequencei

Sequence statusi: Complete.

Q9PU58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATRVLHSSC SGLYRAAGPA RGKGHATAVI RSLSASHNRP REDSWFKSLF
60 70 80 90 100
VRKVDPRKDA HSHLLAKKED NNLYKIQFHN VKPECLEAYN KLCEDVLTNI
110 120 130 140 150
HTDKAYPCEL VGTWNTWYGE QDQAVHLWRY RGGYPALTEV MSKLKNNKEF
160 170 180 190 200
LEYRSERGKM LLSRRNQLLL EFSFWNEPVP RDGPNIYELR SYQLRPGTMI
210 220 230 240 250
EWGNYWARAI GYRQHNREAV GGFFSQIGDL YMVHHLWAYK DLQSREDTRN
260 270 280
AAWQHEGWDE VVYYTVPLIQ HMESRIMIPL KNSPLK
Length:286
Mass (Da):33,572
Last modified:February 1, 2005 - v2
Checksum:i47EE14A11B4E663A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti1M → S in CAB56702 (Ref. 1) Curated1
Sequence conflicti107P → T in CAB56702 (Ref. 1) Curated1
Sequence conflicti237W → L in CAB56702 (Ref. 1) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ249797 mRNA Translation: CAB56702.1
BC081660 mRNA Translation: AAH81660.1
RefSeqiNP_571109.1, NM_131034.1
UniGeneiDr.8058

Genome annotation databases

EnsembliENSDART00000155682; ENSDARP00000129582; ENSDARG00000007264
GeneIDi30232
KEGGidre:30232

Similar proteinsi

Entry informationi

Entry nameiNIPS2_DANRE
AccessioniPrimary (citable) accession number: Q9PU58
Secondary accession number(s): Q642H4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: February 1, 2005
Last modified: April 25, 2018
This is version 81 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health