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Protein

Olfactory receptor

Gene

or103-1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Keywords - Biological processi

OlfactionUniRule annotationSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptorUniRule annotation
Gene namesi
Name:or103-1Imported
Synonyms:OR 13.1Imported, or13.1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-000329-13. or103-1.

Subcellular locationi

  • Cell membrane UniRule annotationSAAS annotation; Multi-pass membrane protein UniRule annotationSAAS annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei28 – 5023HelicalUniRule annotationAdd
BLAST
Transmembranei62 – 8322HelicalUniRule annotationAdd
BLAST
Transmembranei103 – 12119HelicalUniRule annotationAdd
BLAST
Transmembranei142 – 16221HelicalUniRule annotationAdd
BLAST
Transmembranei201 – 22626HelicalUniRule annotationAdd
BLAST
Transmembranei246 – 26924HelicalUniRule annotationAdd
BLAST
Transmembranei275 – 29521HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 293252G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410JAC3. Eukaryota.
ENOG410YCQX. LUCA.
HOVERGENiHBG017625.
KOiK04257.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9PRJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAGNISFVK EFFIVGFPGL QKGYFDSVAA LMLFVFVCIL AGNGTFLILF
60 70 80 90 100
SLEKSLHKPM YYVILNLVAS DILFSTTTLP KIIARYLFQD GGISFMGCFI
110 120 130 140 150
QMYFVHYFGT VNAFILAIMA FDRYVAICNP LRYPNIVTKW NIFYLCLISW
160 170 180 190 200
VIANVTPLMM VIRAYPLPYC AENTIIQCYC DHISITSLAC TNRAPYSIPA
210 220 230 240 250
FVLAMVALLT PLAFIVFSYC AIILAVLRIS STQARLKTFS TCSPQLIIIA
260 270 280 290 300
LYFLPRCFIY LSSNIGIYFS TDLRLAIIMM YSLFPPMFNP LIYCLRTKDV
310 320
KECLVKRLKI STNVKFNLTK VDISSVSS
Length:328
Mass (Da):37,091
Last modified:May 1, 2000 - v1
Checksum:i403575DD0EEDCD07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012746 mRNA. Translation: AAC60253.1.
AF012753 Genomic DNA. Translation: AAC60262.1.
AF112374 Genomic DNA. Translation: AAF27264.1.
RefSeqiNP_571663.1. NM_131588.1.
UniGeneiDr.75767.

Genome annotation databases

GeneIDi58111.
KEGGidre:58111.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012746 mRNA. Translation: AAC60253.1.
AF012753 Genomic DNA. Translation: AAC60262.1.
AF112374 Genomic DNA. Translation: AAF27264.1.
RefSeqiNP_571663.1. NM_131588.1.
UniGeneiDr.75767.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi58111.
KEGGidre:58111.

Organism-specific databases

CTDi58111.
ZFINiZDB-GENE-000329-13. or103-1.

Phylogenomic databases

eggNOGiENOG410JAC3. Eukaryota.
ENOG410YCQX. LUCA.
HOVERGENiHBG017625.
KOiK04257.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Asynchronous onset of odorant receptor expression in the developing zebrafish olfactory system."
    Barth A.L., Justice N.J., Ngai J.
    Neuron 16:23-34(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: OlfactoryImported.
  2. "Noncoordinate expression of odorant receptor genes tightly linked in the zebrafish genome."
    Barth A.L., Dugas J.C., Ngai J.
    Neuron 19:359-369(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ABImported.
    Tissue: OlfactoryImported.
  3. "Analysis and characterization of an odorant receptor gene cluster in the zebrafish genome."
    Dugas J.C., Ngai J.
    Genomics 71:53-65(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ABImported.

Entry informationi

Entry nameiQ9PRJ2_DANRE
AccessioniPrimary (citable) accession number: Q9PRJ2
Secondary accession number(s): Q90431
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 6, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.