Q9PR10 (ATPD_UREPA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
ATP synthase subunit delta

Alternative name(s):
ATP synthase F(1) sector subunit delta
F-type ATPase subunit delta
Short name=F-ATPase subunit delta

Gene names

Name:	atpH
Ordered Locus Names:	UU134

Organism

Ureaplasma parvum serovar 3 (strain ATCC 700970) [Complete proteome] [HAMAP]

Taxonomic identifier

273119 [NCBI]

Taxonomic lineage

Bacteria › Tenericutes › Mollicutes › Mycoplasmataceae › Ureaplasma

Protein attributes

Sequence length	179 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation By similarity. HAMAP MF_01416 This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction By similarity. HAMAP MF_01416
Subunit structure	F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.
Subcellular location	Cell membrane; Peripheral membrane protein By similarity HAMAP MF_01416.
Sequence similarities	Belongs to the ATPase delta chain family.

Ontologies

Keywords
Biological process	ATP synthesis Hydrogen ion transport Ion transport Transport
Cellular component	CF(1) Cell membrane Membrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, catalytic core F(1) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrogen ion transporting ATP synthase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 179	179	ATP synthase subunit delta HAMAP MF_01416		PRO_0000371188

Sequences

	Sequence		Length	Mass (Da)
	Q9PR10 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 2D27F05C25988415	FASTA	179	20,479
	10 20 30 40 50 60 MKSSLKPVEK YAYSIFEIAK EEKKLDLYKH NLETINSIIE EVPAFFEAVG DPARDRNERK 70 80 90 100 110 120 QIVIKNLEGE IDIYLISLID LLIDVKSVKL LKKIVLKALD FVNEALSVKK VLITTAYELT 130 140 150 160 170 KNQIDRLLQS LKKKYVCEKI EPIVVVDKSI IGGLSINFES QVLDNSLKTK LFNIVKKVN

References

[1]	"The complete sequence of the mucosal pathogen Ureaplasma urealyticum." Glass J.I., Lefkowitz E.J., Glass J.S., Heiner C.R., Chen E.Y., Cassell G.H. Nature 407:757-762(2000) [PubMed: 11048724] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700970.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF222894 Genomic DNA. Translation: AAF30540.1.
RefSeq	NP_077965.1. NC_002162.1.
3D structure databases
ProteinModelPortal	Q9PR10.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	876007.
GenomeReviews	Gene locus UU134 in contig AF222894_GR.
KEGG	uur:UU134.
PATRIC	20533804. VBIUrePar45146_0140.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG734362.
OMA	SNIDPLM.
ProtClustDB	CLSK2298782.
Enzyme and pathway databases
BioCyc	UURE95667:UU134-MONOMER.
Family and domain databases
HAMAP	MF_01416. ATP_synth_delta_bact. [Tree]
InterPro	IPR000711. ATPase_F1-cplx_OSCP/dsu. [Graphical view]
Gene3D	G3DSA:1.10.520.20. ATPase_F1_OSCP/d. 1 hit.
KO	K02113.
Pfam	PF00213. OSCP. 1 hit. [Graphical view]
PRINTS	PR00125. ATPASEDELTA.
SUPFAM	SSF47928. ATPsynt_OSCP. 1 hit.
TIGRFAMs	TIGR01145. ATP_synt_delta. 1 hit.
PROSITE	PS00389. ATPASE_DELTA. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ATPD_UREPA

Accession

Primary (citable) accession number: Q9PR10

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 5, 2009
Last sequence update:	October 1, 2000
Last modified:	January 25, 2012
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program