Reviewed, UniProtKB/Swiss-Prot Q9PNC3 (Y1172_CAMJE)

Names and origin

Protein names

Recommended name:
    UPF0082 protein Cj1172c

Gene names

Ordered Locus Names:

Cj1172c

Organism

Campylobacter jejuni [Complete proteome] [HAMAP]

Taxonomic identifier

197 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Belongs to the UPF0082 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
fliM	Q0PC73	1	EBI-1195377,EBI-1191095

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 235	235	UPF0082 protein Cj1172c HAMAP MF_00693		PRO_0000175779

Sequences

	Sequence		Length	Mass (Da)
	Q9PNC3-1 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 43C9E17E894D9A7B	FASTA	235	25,769
	10 20 30 40 50 60 MGRAFEYRRA SKEARWDKMS KLFPKLAKAI QVAAKEGGTD PDMNPKLRSA IATAKANNMP 70 80 90 100 110 120 KDNIDAAIKR ASGKDSADIK NIHYEGKAAH GALVIVECMS DNPTRTVANV KAIFSKNGGE 130 140 150 160 170 180 VLQNGSLGFM FTRKAVFHLE KFAGDLEELE LDLIDAGLEE LEQNEEELVI SGDYTAFGEL 190 200 210 220 230 SSAIEAKGLV LKKAGLEYIP NNPVSFSEEQ LSDIEKLLDK LEDDDDVQAV YTNID

References

[1]

"The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences." Parkhill J., Wren B.W., Mungall K.L., Ketley J.M., Churcher C.M., Basham D., Chillingworth T., Davies R.M., Feltwell T., Holroyd S., Jagels K., Karlyshev A.V., Moule S., Pallen M.J., Penn C.W., Quail M.A., Rajandream M.A., Rutherford K.M. , van Vliet A.H.M., Whitehead S., Barrell B.G. Nature 403:665-668(2000) [PubMed: 10688204] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NCTC 11168 / Serotype O:2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL111168 Genomic DNA. Translation: CAL35287.1.
PIR	F81322.
RefSeq	YP_002344563.1.
3D structure databases
HSSP	HSSP built from PDB template 1KON based on UniProtKB P24237.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9PNC3. 10 interactions.
Genome annotation databases
GeneID	905462.
GenomeReviews	Gene locus Cj1172c in contig AL111168_GR.
KEGG	cje:Cj1172c.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	Q9PNC3. DKMSKVF.
Enzyme and pathway databases
BioCyc	CJEJ192222:CJ1172C-MON.
Family and domain databases
HAMAP	MF_00693. [Tree]
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
PANTHER	PTHR12532. DUF28. 1 hit.
Pfam	PF01709. DUF28. 1 hit. [Graphical view]
ProDom	PD004323. DUF28. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR01033. DUF28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Y1172_CAMJE

Accession

Primary (citable) accession number: Q9PNC3
Secondary accession number(s): Q0P984

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 4, 2003
Last sequence update:	October 1, 2000
Last modified:	June 16, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)