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Q9PGP3 (Q9PGP3_XYLFA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
dTDP-glucose 4,6-dehydratase RuleBase RU004473
EC=4.2.1.46 RuleBase RU004473
Gene names
Ordered Locus Names:XF_0255
OrganismXylella fastidiosa [Complete proteome] [HAMAP]
Taxonomic identifier2371 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

dTDP-glucose = dTDP-4-dehydro-6-deoxy-D-glucose + H2O. RuleBase RU004473

Cofactor

NAD By similarity. RuleBase RU004473

Sequence similarities

Belongs to the sugar epimerase family. dTDP-glucose dehydratase subfamily. RuleBase RU004473

Sequences

Sequence LengthMass (Da)Tools
Q9PGP3 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 47BD41EE4BA8F0AE

FASTA35338,682
        10         20         30         40         50         60 
MGLATWLVTG GAGFIGGNFV LQAISLGHRV INLDALTYAG HLETLALLDG CAEHLFVRGD 

        70         80         90        100        110        120 
IGDRALVSCL LDTHRPDAVL NFAAESHVDR SIDAPAAFIQ TNVVGTLLLL EAVCGYWKAL 

       130        140        150        160        170        180 
PEAARAAFRF LHVSTDEVYG SLGETGAFTE RTAYAPNSPY SASKAASDHL VRAFHHTYGL 

       190        200        210        220        230        240 
PVLTTHCSNN YGPYHFPEKL IPLVITKALA GEPLPVYGDG RHVRDWLFVG DHCTALCAVL 

       250        260        270        280        290        300 
AGGRVGETYN IGGQAERENL EVVRMICRLL DERRPRADGQ SYQSQIVHVA DRPGHDRRYA 

       310        320        330        340        350 
IDTSKLVSEL GWAPVYRFEQ GLALTVDWYL QHQDWVRAVL QGRDRVEGLL IAV

« Hide

References

[1]"The genome sequence of the plant pathogen Xylella fastidiosa."
Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. expand/collapse author list , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
Nature 406:151-159(2000) [PubMed: 10910347] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a5c.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003849 Genomic DNA. Translation: AAF83068.1.
PIRB82828.
RefSeqNP_297548.1. NC_002488.3.

3D structure databases

HSSPHSSP built from PDB template 1BXK based on UniProtKB P27830.
ProteinModelPortalQ9PGP3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1125781.
GenomeReviewsGene locus XF_0255 in contig AE003849_GR.
KEGGxfa:XF0255.
NMPDRfig|160492.1.peg.255.
PATRIC24130441. VBIXylFas578_0269.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG755066.
OMADQHRPRE.
ProtClustDBCLSK445958.

Enzyme and pathway databases

BioCycXFAS160492:XF0255-MONOMER.

Family and domain databases

InterProIPR005888. dTDP_Gluc_deHydtase.
IPR001509. Epimerase_deHydtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK01710.
PANTHERPTHR10366:SF41. PTHR10366:SF41. 1 hit.
PfamPF01370. Epimerase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01181. DTDP_gluc_dehyt. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9PGP3_XYLFA
AccessionPrimary (citable) accession number: Q9PGP3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: December 14, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info