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Q9PGN9 (Q9PGN9_XYLFA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Phosphomannose isomerase-GDP-mannose pyrophosphorylase EMBL AAF83072.1
Gene names
Ordered Locus Names:XF_0259
OrganismXylella fastidiosa [Complete proteome] [HAMAP]
Taxonomic identifier2371 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the mannose-6-phosphate isomerase type 2 family. RuleBase RU004190

Ontologies

Keywords
   Molecular functionIsomerase EMBL AAF83072.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipopolysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionisomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

nucleotidyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9PGN9 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: B5CEF97397C4ADA1

FASTA48252,985
        10         20         30         40         50         60 
MLPTSHTPCM ESAPPMNDIL PVILSGGSGT RLWPLSREAY PKQFLPLVGH HSMLQATWLR 

        70         80         90        100        110        120 
AAPVTTHSPI VVANEEHRFI AAEQLQHLGV YPSAILLEPT GRNTAPAIAV AALEATRTGN 

       130        140        150        160        170        180 
DPLLLVLPSD HVIRDEAAFQ TAVHVAAEAA AQGKLVTFGI TPNTPEIGYG YIKATGNDTI 

       190        200        210        220        230        240 
RPVERFIEKP DLATAQSYLA SGDYFWNSGM FLFRASRYLA ELSTFQPAIA EACQRAWSAA 

       250        260        270        280        290        300 
KRDTDFIRLD KEAFENSPAD SIDYAVMEHT ADAVAVPLDA GWNDVGSWSA LHEVSKQDND 

       310        320        330        340        350        360 
GNAHQGDVIQ IDCRNTYAYG SRLIAMVGLE NVVVVETDDA LLVGHRDSIQ TVKEIVGKIK 

       370        380        390        400        410        420 
ANGRPEATWH RKVYRPWGAY DSIDTGQRFQ VKRITVKPGG TLSLQMHHHR AEHWIIVSGT 

       430        440        450        460        470        480 
AEVTRGSEIL LLTENQSTYI PLGVTHRLRN PGKLPLELIE VQSGSYLGED DIVRFEDTYG 


RT

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References

[1]"The genome sequence of the plant pathogen Xylella fastidiosa."
Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. expand/collapse author list , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
Nature 406:151-159(2000) [PubMed: 10910347] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a5c.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003849 Genomic DNA. Translation: AAF83072.1.
PIRF82828.
RefSeqNP_297552.1. NC_002488.3.

3D structure databases

ProteinModelPortalQ9PGN9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1125785.
GenomeReviewsGene locus XF_0259 in contig AE003849_GR.
KEGGxfa:XF0259.
NMPDRfig|160492.1.peg.259.
PATRIC24130451. VBIXylFas578_0274.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG422488.
OMADVGSWTA.
ProtClustDBCLSK445961.

Enzyme and pathway databases

BioCycXFAS160492:XF0259-MONOMER.

Family and domain databases

InterProIPR011051. Cupin_RmlC_type.
IPR006375. Man1P_GuaTrfase/Man6P_Isoase.
IPR001538. Man6P_isomerase-2_C.
IPR005835. NTP_transferase.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
Gene3DG3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
KOK00971.
K01809.
PfamPF01050. MannoseP_isomer. 1 hit.
PF00483. NTP_transferase. 1 hit.
[Graphical view]
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
TIGRFAMsTIGR01479. GMP_PMI. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9PGN9_XYLFA
AccessionPrimary (citable) accession number: Q9PGN9
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: December 14, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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