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Q9PGK6 (Q9PGK6_XYLFA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aconitate hydratase 2 PIRNR PIRNR036687
EC=4.2.1.3 PIRNR PIRNR036687
Gene names
Ordered Locus Names:XF_0292
OrganismXylella fastidiosa [Complete proteome] [HAMAP]
Taxonomic identifier2371 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length886 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Citrate = isocitrate. PIRNR PIRNR036687

Pathway

Carbohydrate metabolism; tricarboxylic acid cycle. PIRNR PIRNR036687

Sequence similarities

Belongs to the aconitase/IPM isomerase family. PIRNR PIRNR036687

Sequences

Sequence LengthMass (Da)Tools
Q9PGK6 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: A473490E657C4387

FASTA88696,019
        10         20         30         40         50         60 
MSASIHTLSI LNYLCGELPM LEAYRHHVAE RAALGIPPLP LSAQQTADVI ELFKAPPAGE 

        70         80         90        100        110        120 
EDFLLDLITY RVPGGVDDAA KVKASYLAAV AFGTEVTPLL TPQRATELLA TMLGGYNIQP 

       130        140        150        160        170        180 
LIDLLDHAAL GQVAAEGLKH TLLVFDAFHD VQEKAEQGNG NARAVLESWA AAEWFTSKPE 

       190        200        210        220        230        240 
VPHCLTVTVF KVPGETNTDD LSPAPDATTR PDIPMHALAM LKNTREGAPF VPEEDGKRGP 

       250        260        270        280        290        300 
IQEMLSLKEK GHLVAYVGDV VGTGSSRKSA TNSVLWWTGK DIPYIPNKRF GGVCLGSKIA 

       310        320        330        340        350        360 
PIFYNTMEDA GALPIELDVS KMEHGDVIEL YPYEGKARKN GAVIAEFSLK SDVLLDEVRA 

       370        380        390        400        410        420 
GGRIPLIIGR GLTSKAREAL KLEPTSLFRL PVNPPETGRG FSLAQKIVGR ACGLPEVNGK 

       430        440        450        460        470        480 
QQGMRPGTYC EPKMTSVGSQ DTTGPMTRDE LKDLACLGFS ADLVMQSFCH TAAYPKPVDV 

       490        500        510        520        530        540 
KTHHTLPEFI STRGGVSLRP GDGVIHSWLN RMLLPDTVGT GGDSHTRFPI GLSFPAGSGL 

       550        560        570        580        590        600 
VAFAAATGVM PLDMPESVLV RFKGHMQPGV TLRDLVNAIP LYAIKQGLLT VAKQGKKNIF 

       610        620        630        640        650        660 
SGRILEIEGL PNLKVEQAFE LSDASAERSA AGCTVRLNKE PIIEYLNSNI TLLKWMIAEG 

       670        680        690        700        710        720 
YADARSLTRR IKKMEAWLAD PQLIEPDTDV EYAAVIEIDL ADIHEPIVAC PNDPDDVKTL 

       730        740        750        760        770        780 
SEVAGAKIDE VFIGSCMTNI GHFRAAAKLL EGKRDIPTRL WVAPPTKMDA SELTKEGYYG 

       790        800        810        820        830        840 
TFGNAGARME MPGCSLCMGN QAQAREGATV FSTSTRNFPN RLGRNTNVYL GSAELAAICS 

       850        860        870        880 
RLGKIPTKDE YMADIGVIDT QRTEIYRYMN FDQIQEYLDV DHTAVA

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References

[1]"The genome sequence of the plant pathogen Xylella fastidiosa."
Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. expand/collapse author list , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
Nature 406:151-159(2000) [PubMed: 10910347] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a5c.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003849 Genomic DNA. Translation: AAF83105.1.
PIRA82825.
RefSeqNP_297585.1. NC_002488.3.

3D structure databases

HSSPHSSP built from PDB template 1L5J based on UniProtKB P36683.
ProteinModelPortalQ9PGK6.
SMRQ9PGK6. Positions 20-879.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1125818.
GenomeReviewsGene locus XF_0292 in contig AE003849_GR.
KEGGxfa:XF0292.
NMPDRfig|160492.1.peg.292.
PATRIC24130533. VBIXylFas578_0315.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG284496.
OMAGVRPGMY.
ProtClustDBPRK09238.

Enzyme and pathway databases

BioCycXFAS160492:XF0292-MONOMER.

Family and domain databases

InterProIPR015931. Acnase/IPM_dHydase_lsu_aba_1/3.
IPR015937. Acoase/IPM_deHydtase.
IPR001030. Acoase/IPM_deHydtase_lsu_aba.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR018136. Aconitase_4Fe-4S_BS.
IPR004406. Aconitase_B_bac.
IPR015930. Aconitase_B_FeS-bd_bac.
IPR015933. Aconitase_B_HEAT-like_bac.
IPR015929. Aconitase_B_N_bac.
[Graphical view]
Gene3DG3DSA:3.30.499.10. Acnase/IPM_dHydase_lsu_aba_1/3. 2 hits.
G3DSA:3.20.19.10. Aconitase/3IPM_dehydase_swvl. 1 hit.
KOK01682.
PANTHERPTHR11670. Aconitase-like_core. 1 hit.
PTHR11670:SF3. Aconitase_2. 1 hit.
PfamPF00330. Aconitase. 2 hits.
PF06434. Aconitase_2_N. 1 hit.
PF11791. Aconitase_B_N. 1 hit.
[Graphical view]
PIRSFPIRSF036687. AcnB. 1 hit.
SUPFAMSSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
SSF74778. Aconitase_B_HEAT-like_bac. 1 hit.
SSF53732. Aconitase_N. 1 hit.
TIGRFAMsTIGR00117. AcnB. 1 hit.
PROSITEPS00450. ACONITASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9PGK6_XYLFA
AccessionPrimary (citable) accession number: Q9PGK6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: December 14, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info