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Reviewed, UniProtKB/Swiss-Prot Q9PFV5 (Y552_XYLFA)

Last modified November 3, 2009. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    UPF0011 protein XF_0552
Gene names
Ordered Locus Names: XF_0552
OrganismXylella fastidiosa [Complete proteome] [HAMAP]
Taxonomic identifier2371 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

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Protein attributes

Sequence length273 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Sequence similarities

Belongs to the UPF0011 family.

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Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processmetabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionmethyltransferase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 273273UPF0011 protein XF_0552
PRO_0000211962

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Sequences

Sequence LengthMass (Da)Tools
Q9PFV5-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 54BCA2399A76D8B6

FASTA27329,234
        10         20         30         40         50         60 
MSTPGTLHIV ATPIGNLGDL SPRAQHILRT VTMICAEDTR HTRQLLAHFG IERPLLALHA 

        70         80         90        100        110        120 
HNEDTLAERI ITRLISGASL ALVSDAGTPL ISDPGFLLVR AARAAGIRVT PVPGPSALIA 

       130        140        150        160        170        180 
ALSVSGLPSN RFTFEGFLPA KPTARRDRLT HLAHEPRTLI FYEASHRIAE CLTDLATIFG 

       190        200        210        220        230        240 
SMRAAVVARE LTKIFETVLD GTLATLQTQV ANDDNQRKGE FVIIVQGAAD QDAAKITEGR 

       250        260        270 
RVYALLKEHL PPSSAAKLAA EITGAPRKAL YGG

« Hide

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References

[1]"The genome sequence of the plant pathogen Xylella fastidiosa."
Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. expand/collapse author list , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
Nature 406:151-159(2000) [PubMed: 10910347] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a5c.

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Cross-references

Sequence databases

AE003849 Genomic DNA. Translation: AAF83362.1.
PIRF82792.
RefSeqNP_297842.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID1126083.
GenomeReviewsGene locus XF_0552 in contig AE003849_GR.
KEGGxfa:XF0552.
NMPDRfig|160492.1.peg.549.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9PFV5.
OMAASDRFCF

Enzyme and pathway databases

BioCycXFAS160492:XF0552-MON.

Family and domain databases

InterProIPR000878. 4pyrrol_Mease.
IPR014777. 4pyrrole_Mease_sub1.
IPR008189. UPF0011.
IPR018063. UPF0011_CS.
[Graphical view]
Gene3DG3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
PfamPF00590. TP_methylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00096. UPF0011. 1 hit.
PROSITEPS01296. UPF0011. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameY552_XYLFA
AccessionPrimary (citable) accession number: Q9PFV5
Entry history
Integrated into UniProtKB/Swiss-Prot: November 2, 2001
Last sequence update: October 1, 2000
Last modified: November 3, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents