Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Cystathionine beta-synthase

Gene

XF_0603

Organism
Xylella fastidiosa (strain 9a5c)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. cysteine biosynthetic process from serine Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cystathionine beta-synthaseImported
Gene namesi
Ordered Locus Names:XF_0603Imported
OrganismiXylella fastidiosa (strain 9a5c)Imported
Taxonomic identifieri160492 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
ProteomesiUP000000812: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi160492.XF0603.

Structurei

3D structure databases

ProteinModelPortaliQ9PFQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01697.
OMAiDANPLAH.
OrthoDBiEOG6Q2SP8.

Family and domain databases

InterProiIPR000644. CBS_dom.
IPR001216. P-phosphate_BS.
IPR001926. TrpB-like_PLP-dep.
[Graphical view]
PfamiPF00571. CBS. 1 hit.
PF00291. PALP. 1 hit.
[Graphical view]
SMARTiSM00116. CBS. 1 hit.
[Graphical view]
SUPFAMiSSF53686. SSF53686. 1 hit.
PROSITEiPS51371. CBS. 1 hit.
PS00901. CYS_SYNTHASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9PFQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVIHSSVLEL IGNTPIVKAQ RLDTGLCDLF LKLESANPGG SIKDRVGLSM
60 70 80 90 100
IEAAECRGHI KPGATLVDGA ASSTSMGLAF VARQKGYRLI LVVPDNMAWE
110 120 130 140 150
KISNLKAMGA EVILTRSDVS KGHPEHYQDL AEKLAAETPG AYFINQFGNA
160 170 180 190 200
DNPAAHEFGT GPEILKQMGD HVDAVVLGCD SAGTITGLSR AFDSVASDVE
210 220 230 240 250
LILADPVGSI LTQYINEGTC SDKSGTWLVE GIGSDCLPPI SDFRRIKKTY
260 270 280 290 300
AISDAESFHT ARELLSKEGI LGGSSTGTLL AAALKYCREQ IERKRVLVFV
310 320 330 340 350
CDTGNKYLLN MYNDDWMLDN GFLKRPHYGD LRDLILHPYS QRHTVVVDPN
360 370 380 390 400
DLLTVAYQRM KRYGVSQLPV IEDGQLVGIL DESDVLLHVY GDETRFCDPV
410 420 430 440 450
STAMVSKLHR LDVKSPIEGL LPVFERGQVA IVMEDAQFLG LITRIDLLNY

LRRRMQ
Length:456
Mass (Da):50,010
Last modified:October 1, 2000 - v1
Checksum:i51D51CF683C0B8E5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003849 Genomic DNA. Translation: AAF83413.1.
PIRiG82784.
RefSeqiNP_297893.1. NC_002488.3.
WP_010893128.1. NC_002488.3.

Genome annotation databases

EnsemblBacteriaiAAF83413; AAF83413; XF_0603.
GeneIDi1126134.
KEGGixfa:XF0603.
PATRICi24131201. VBIXylFas578_0644.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003849 Genomic DNA. Translation: AAF83413.1.
PIRiG82784.
RefSeqiNP_297893.1. NC_002488.3.
WP_010893128.1. NC_002488.3.

3D structure databases

ProteinModelPortaliQ9PFQ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi160492.XF0603.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAF83413; AAF83413; XF_0603.
GeneIDi1126134.
KEGGixfa:XF0603.
PATRICi24131201. VBIXylFas578_0644.

Phylogenomic databases

KOiK01697.
OMAiDANPLAH.
OrthoDBiEOG6Q2SP8.

Family and domain databases

InterProiIPR000644. CBS_dom.
IPR001216. P-phosphate_BS.
IPR001926. TrpB-like_PLP-dep.
[Graphical view]
PfamiPF00571. CBS. 1 hit.
PF00291. PALP. 1 hit.
[Graphical view]
SMARTiSM00116. CBS. 1 hit.
[Graphical view]
SUPFAMiSSF53686. SSF53686. 1 hit.
PROSITEiPS51371. CBS. 1 hit.
PS00901. CYS_SYNTHASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the plant pathogen Xylella fastidiosa."
    Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A.
    , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
    Nature 406:151-159(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9a5cImported.

Entry informationi

Entry nameiQ9PFQ4_XYLFA
AccessioniPrimary (citable) accession number: Q9PFQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: March 4, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.