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Q9PES8 (Q9PES8_XYLFA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Riboflavin-specific deaminase EMBL AAF83760.1
Gene names
Ordered Locus Names:XF_0950
OrganismXylella fastidiosa [Complete proteome] [HAMAP]
Taxonomic identifier2371 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q9PES8 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: C5B16D70802D293B

FASTA36438,752
        10         20         30         40         50         60 
MSAFSVDDYR HMERALCLAE RGAYTTRPNP MVGCVIVRDG EVVGEGWHQR AGDPHAEVFA 

        70         80         90        100        110        120 
LCAAGDRARG ATAYVTLEPC AHLGRTPPCA MALIDAGVRR VVAAMVDPFP LVNGGGVTLL 

       130        140        150        160        170        180 
RAAGVTVEHG LMEAQARALN RGFLSRVERG RPWVRIKLGS SLDGRTALAS GESKWITGEA 

       190        200        210        220        230        240 
ARADVQRWRA RASAILTGAG TVLADDPALT VRLGGEEGAF LPPLRVVLDS RLRSLSCVKV 

       250        260        270        280        290        300 
RDGTAPTLYL HGFGVTSPVL QHVDFSEVQQ RDAGLDLEAV LRLLGERGIN EVQVEAGATL 

       310        320        330        340        350        360 
CGALLHAGLV DELLIYIAPL LLGDTARPLL AGLDIGRMDQ CIGLKVLEVV QVGNDLRLLL 


RPCG

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References

[1]"The genome sequence of the plant pathogen Xylella fastidiosa."
Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. expand/collapse author list , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.
Nature 406:151-159(2000) [PubMed: 10910347] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9a5c.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE003849 Genomic DNA. Translation: AAF83760.1.
PIRG82740.
RefSeqNP_298240.1. NC_002488.3.

3D structure databases

ProteinModelPortalQ9PES8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1126486.
GenomeReviewsGene locus XF_0950 in contig AE003849_GR.
KEGGxfa:XF0950.
NMPDRfig|160492.1.peg.947.
PATRIC24131956. VBIXylFas578_1017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG668075.
OMAGWHERAG.
ProtClustDBCLSK446131.

Enzyme and pathway databases

BioCycXFAS160492:XF0950-MONOMER.

Family and domain databases

InterProIPR016192. APOBEC/CMP_deaminase_Zn-bd.
IPR002125. CMP_dCMP_Zn-bd.
IPR016193. Cytidine_deaminase-like.
IPR024072. DHFR-like_dom.
IPR004794. Eubact_RibD.
IPR011549. RibD_C.
IPR002734. RibDG_C.
[Graphical view]
Gene3DG3DSA:3.40.430.10. G3DSA:3.40.430.10. 1 hit.
KOK11752.
PANTHERPTHR11079:SF10. Eubact_ribD. 1 hit.
PfamPF00383. dCMP_cyt_deam_1. 1 hit.
PF01872. RibD_C. 1 hit.
[Graphical view]
SUPFAMSSF53927. Cytidine_deaminase-like. 1 hit.
SSF53597. SSF53597. 1 hit.
TIGRFAMsTIGR00326. Eubact_ribD. 1 hit.
TIGR00227. RibD_Cterm. 1 hit.
PROSITEPS00903. CYT_DCMP_DEAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9PES8_XYLFA
AccessionPrimary (citable) accession number: Q9PES8
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: December 14, 2011
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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