Q9PDW2 (Q9PDW2_XYLFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
1,4-beta-cellobiosidase EMBL AAF84076.1

Gene names

Ordered Locus Names:

XF_1267

Organism

Xylella fastidiosa [Complete proteome] [HAMAP]

Taxonomic identifier

2371 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella

Protein attributes

Sequence length	683 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellulose catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro polysaccharide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9PDW2 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: DC8FB5F76B8E8D5F	FASTA	683	70,853
	10 20 30 40 50 60 MSVSLLAGSL FSTPDVHAEA HVDNPFVDAT SYLNPDYSKD IDTSIAKVND VSLKEKMQTI 70 80 90 100 110 120 KNYPTGVWLD TIDAVKGGPK NPGRLNLTGH LDAALAQKKG NTPITATFVI YDIPGRDCHA 130 140 150 160 170 180 LASNGELPLT PEGLQRYKRE YIDTIASIFS NPKYKDIRIV NIIEPDSLPN IITNMSTPSC 190 200 210 220 230 240 AQAKNTGIYE EGIKYALNKL SEIPNVYNYM DIGHSGWLGW DTNRIPAVSL YTKVIQSTTA 250 260 270 280 290 300 GFASVNGFAT NTANTTPLIE PNLPNPDLNI GGQPIRSSKF YEWNRYFDEM DYSETLYNDF 310 320 330 340 350 360 VAAGWPSSIG FIIDTGRNGW GGPERPTSAF GNDVNSYVNS GRIDRRNHRG NWCNQKDAGI 370 380 390 400 410 420 GLPPIATPGG HVDAFQWIKP PGYSDGSSSL IPNDQGKGFD RYCDPTFTTP DGVLTGALPD 430 440 450 460 470 480 APLSGDWFHA QFVKLINNAY PDISRTPLPG SGSSSSSGSS SSSGSSSSSG SSSSSGSSSS 490 500 510 520 530 540 SGSSSSSGSS SSSGSSSSSG SSSSSGSSSS SGSSSSSGSS SSSGSSSSSG SSSSSGSSSS 550 560 570 580 590 600 SGSSSSSGSS SSSGSSSSSG SSSGSSSGSG FNPGAGFNPG AGFNPGAGFN PGAGSDPTKN 610 620 630 640 650 660 PITSSITVDS DWHTGYCERV KVTNTGSSRS SWTVTIPLKG TIQTLWSATW SLSGSDKLIA 670 680 SGLDWNKTLE PNGTTEFGFC ANY

References

[1]

"The genome sequence of the plant pathogen Xylella fastidiosa." Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M., Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S., Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S., Bueno M.R.P., Camargo A.A., Camargo L.E.A. , Carraro D.M., Carrer H., Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M., Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H., Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S., Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H., Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D., Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E., Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F., Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N., Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F., Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y., Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O., Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A., de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R., Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B., Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G., Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M., da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z., Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D., Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S., Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C. Nature 406:151-159(2000) [PubMed: 10910347] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 9a5c.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE003849 Genomic DNA. Translation: AAF84076.1.
PIR	A82704.
RefSeq	NP_298556.1. NC_002488.3.
3D structure databases
HSSP	HSSP built from PDB template 1GZ1 based on UniProtKB Q9C1S9.
ProteinModelPortal	Q9PDW2.
ModBase	Search...
Protein family/group databases
CAZy	CBM2. Carbohydrate-Binding Module Family 2. GH6. Glycoside Hydrolase Family 6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1126813.
GenomeReviews	Gene locus XF_1267 in contig AE003849_GR.
KEGG	xfa:XF1267.
NMPDR	fig|160492.1.peg.1263.
PATRIC	24132633. VBIXylFas578_1345.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG756137.
ProtClustDB	CLSK537118.
Enzyme and pathway databases
BioCyc	XFAS160492:XF1267-MONOMER.
Family and domain databases
InterPro	IPR016288. Beta_cellobiohydrolase. IPR008965. Carb-bd_dom. IPR012291. CBD_carb-bd_dom. IPR001919. Cellulose-bd_dom_fam2_bac. [Graphical view]
Gene3D	G3DSA:2.60.40.290. CBD_carb_bd. 1 hit. G3DSA:3.20.20.40. Glyco_hydro_6. 1 hit.
Pfam	PF00553. CBM_2. 1 hit. PF01341. Glyco_hydro_6. 1 hit. [Graphical view]
PRINTS	PR00733. GLHYDRLASE6.
SMART	SM00637. CBD_II. 1 hit. [Graphical view]
SUPFAM	SSF49384. Cellul_bind. 1 hit. SSF51989. Glyco_hydro_6. 1 hit.
PROSITE	PS51173. CBM2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9PDW2_XYLFA

Accession

Primary (citable) accession number: Q9PDW2

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)