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Protein

Glutamine--tRNA ligase

Gene

glnS

Organism
Xylella fastidiosa (strain 9a5c)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei74L-glutamineUniRule annotation1
Binding sitei218L-glutamineUniRule annotation1
Binding sitei237ATPUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi42 – 44ATPUniRule annotation3
Nucleotide bindingi48 – 54ATPUniRule annotation7
Nucleotide bindingi285 – 286ATPUniRule annotation2
Nucleotide bindingi293 – 295ATPUniRule annotation3

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamine--tRNA ligaseUniRule annotation (EC:6.1.1.18UniRule annotation)
Alternative name(s):
Glutaminyl-tRNA synthetaseUniRule annotation
Short name:
GlnRSUniRule annotation
Gene namesi
Name:glnSUniRule annotation
Ordered Locus Names:XF_1338
OrganismiXylella fastidiosa (strain 9a5c)
Taxonomic identifieri160492 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
Proteomesi
  • UP000000812 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001958571 – 580Glutamine--tRNA ligaseAdd BLAST580

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi160492.XF1338.

Structurei

3D structure databases

ProteinModelPortaliQ9PDP1.
SMRiQ9PDP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi41 – 51"HIGH" regionUniRule annotationAdd BLAST11
Motifi292 – 296"KMSKS" regionUniRule annotation5

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotationCurated

Phylogenomic databases

eggNOGiENOG4105CX6. Bacteria.
COG0008. LUCA.
KOiK01886.
OMAiVTHSICT.
OrthoDBiPOG091H00G9.

Family and domain databases

Gene3Di1.10.1160.10. 1 hit.
2.40.240.10. 2 hits.
3.40.50.620. 2 hits.
HAMAPiMF_00126. Gln_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001412. aa-tRNA-synth_I_CS.
IPR004514. Gln-tRNA-synth.
IPR022861. Gln_tRNA_ligase_bac.
IPR000924. Glu/Gln-tRNA-synth.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ib_codon-bd.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
PfamiView protein in Pfam
PF00749. tRNA-synt_1c. 2 hits.
PF03950. tRNA-synt_1c_C. 1 hit.
PRINTSiPR00987. TRNASYNTHGLU.
SUPFAMiSSF50715. SSF50715. 1 hit.
TIGRFAMsiTIGR00440. glnS. 1 hit.
PROSITEiView protein in PROSITE
PS00178. AA_TRNA_LIGASE_I. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9PDP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEITSTDAR AQPEKKDFIR QIIREDLAHG THTHIRTRFP PEPNGYLHIG
60 70 80 90 100
HAKAICLDFG VAAEFGGHCT LRMDDTNPSK EDPAFAAAIQ DDVSWLGFHW
110 120 130 140 150
NALRHTSDYF EVLYLAAEKL ITDGKAYVCD LNSEQVREYR GTLTEAGRPS
160 170 180 190 200
PWRERSPDEN LELFRQMRAG TFPDGTRTLR AKIDMASGNI NLRDPALYRI
210 220 230 240 250
KHVEHQNTGN TWPIYPMYDF AHALSDAIEG ITHSLCTLEF EDHRPLYDWC
260 270 280 290 300
VNHVDLPNNS HLLKPLLDKG FPQEPSQPRQ IEFSRLNINY TVMSKRKLTA
310 320 330 340 350
LVDEKLVEGW DDPRMYTLQG LRRRGYTPAA MRLFVERIGI SKQNSIIDFS
360 370 380 390 400
VLENCLRENL DTIAPRRMAT IAPLKLVLTN LPEDHEEQLI FPNHPKDDTQ
410 420 430 440 450
GTRTMPFSRE LWIERDDFSE IPPKGWKRLV PGGEVRLRGA GIARVDEVVK
460 470 480 490 500
NAAGDIIALH GWLDPTSRPG MEGAHRKVKG TIHWVSAPHA VAAEIRLYDR
510 520 530 540 550
LFSVEKPDDN TDGKTYRDVL NPDSKRVVHG YIEPAAAQTA PEHAFQFERL
560 570 580
GYFVTDRHDH DAAHPVFNRS VTLRDTWQRD
Length:580
Mass (Da):66,294
Last modified:October 1, 2000 - v1
Checksum:iB9013A4D6630C16D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE003849 Genomic DNA. Translation: AAF84147.1.
PIRiG82693.
RefSeqiWP_010893843.1. NC_002488.3.

Genome annotation databases

EnsemblBacteriaiAAF84147; AAF84147; XF_1338.
GeneIDi1126884.
KEGGixfa:XF_1338.

Similar proteinsi

Entry informationi

Entry nameiSYQ_XYLFA
AccessioniPrimary (citable) accession number: Q9PDP1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: October 1, 2000
Last modified: August 30, 2017
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families