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Protein

Pumilio domain-containing protein P35G2.14

Gene

SPBP35G2.14

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Pumilio domain-containing protein P35G2.14
Gene namesi
ORF Names:SPBP35G2.14
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBP35G2.14.
PomBaseiSPBP35G2.14.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10651065Pumilio domain-containing protein P35G2.14PRO_0000310366Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei260 – 2601Phosphothreonine1 Publication
Modified residuei506 – 5061Phosphoserine1 Publication
Modified residuei511 – 5111Phosphoserine1 Publication
Modified residuei515 – 5151Phosphoserine1 Publication
Modified residuei554 – 5541Phosphothreonine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9P789.

PTM databases

iPTMnetiQ9P789.

Interactioni

Protein-protein interaction databases

BioGridi277835. 65 interactions.
MINTiMINT-4704928.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini592 – 66675RRMPROSITE-ProRule annotationAdd
BLAST
Domaini712 – 1065354PUM-HDPROSITE-ProRule annotationAdd
BLAST
Repeati771 – 80838Pumilio 1Add
BLAST
Repeati809 – 84436Pumilio 2Add
BLAST
Repeati846 – 88439Pumilio 3Add
BLAST
Repeati886 – 91732Pumilio 4Add
BLAST
Repeati919 – 95436Pumilio 5Add
BLAST
Repeati956 – 99338Pumilio 6Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi120 – 568449Ser-richAdd
BLAST
Compositional biasi668 – 6769Poly-Ser

Sequence similaritiesi

Contains 1 PUM-HD domain.PROSITE-ProRule annotation
Contains 6 pumilio repeats.PROSITE-ProRule annotation
Contains 1 RRM (RNA recognition motif) domain.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

InParanoidiQ9P789.
KOiK17974.
OrthoDBiEOG7SR4W6.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR012677. Nucleotide-bd_a/b_plait.
IPR033133. PUM-HD.
IPR001313. Pumilio_RNA-bd_rpt.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00806. PUF. 1 hit.
PF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00025. Pumilio. 5 hits.
SM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS50302. PUM. 6 hits.
PS50303. PUM_HD. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9P789-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHQDAMQGSI YEGSRRNTIS KPSNNNPPLD MSSLNNDFGQ QLDSLATGVG
60 70 80 90 100
SGSLNGTTNP SSNFNDSNRS NISSSLRSEM EMSNNLLKNT QNDTWTSTVG
110 120 130 140 150
LSVPENQEAM NFNEGPTGIS SIASKNNSSI TSKLQNNSNL SVTSSANRGR
160 170 180 190 200
TSSVSSSYDP SFPWGPRMSS VSSGKQHLSS LSLHTHFNPS SSSTVSSDSL
210 220 230 240 250
ESSQQKAPSS SSTATPASAA SEIISNKDPV VEPTHSASNA ANSGSNTIRA
260 270 280 290 300
RQTTRTRSNT LPWSPRVFGP TLGYNTPPFG YPPTTSSALP NASGSSSSFF
310 320 330 340 350
GLPTAVSASA GTSFSDISPA APKASLENNI ASNASSLLNP VGLDHFSAAS
360 370 380 390 400
GWSRDFNHLP ASSLATARSS LTGNAKSGID SSVTGMPSDN YARVVESSTA
410 420 430 440 450
EFFDPSLASS FGLTNYRTKP LTTGFNHPRP QGHGLNTSLF NTSSGGSLKS
460 470 480 490 500
PTFEVSNRLG DVDTVPDLPP LGSLSSRPKP SSSSRRRSQS LSAMLKTSNP
510 520 530 540 550
YMPSPSLLSG SLANSSEHSS SPRLRGSPIH NQPVSSSKST ASLNTNNNGL
560 570 580 590 600
RASTPEMANI STRSSSESNN TNSWPTVGDA TIENLTQHEP THALWVGNLP
610 620 630 640 650
SGVSATTVAT TFSAYGTVSS IRMLSHKHSA FLNFDSVETA KHVLEELNGK
660 670 680 690 700
RIFFGSDPVC ISFAKVASSS SESSHSAVDG LNKAFSNVSF VPSLREVYDD
710 720 730 740 750
LINVVQSFGF KDLSKIYQIL NAACELTDFA AQIPSISKAF SSRRLNAPKL
760 770 780 790 800
RQVRKRIDNG LCTQEEVEDI AINWLDEVSD LSSDHLGNTV VQKLFDYCSD
810 820 830 840 850
PVKEMMLERI APHLAQIGIH KNGTWAAQKI VDVASTEAQM RLIAKHLQPY
860 870 880 890 900
IPLLFADQFG NYVVQTCLKF GAPMNDFVFE AILNQFWVIA QSRYGSRAVR
910 920 930 940 950
ACLESPDVTE EQRVLVAAAI TVYSVHLAMN GNGTLLLTYL VENMNYPHIP
960 970 980 990 1000
ILLTRRFVQD IVRVCTHRLA YNSLLKIISI SQGDTACGDL VVDAILDTQN
1010 1020 1030 1040 1050
DLNPNSLEKI LFEQTYGPSF ICKLLTHENI SASHRQQLQS AVRNVLGTME
1060
DRGSSELKKL AEVCA
Length:1,065
Mass (Da):114,230
Last modified:July 11, 2012 - v2
Checksum:i046038A978EE99BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB87376.2.
RefSeqiNP_595389.2. NM_001021296.2.

Genome annotation databases

EnsemblFungiiSPBP35G2.14.1; SPBP35G2.14.1:pep; SPBP35G2.14.
GeneIDi2541323.
KEGGispo:SPBP35G2.14.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB87376.2.
RefSeqiNP_595389.2. NM_001021296.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277835. 65 interactions.
MINTiMINT-4704928.

PTM databases

iPTMnetiQ9P789.

Proteomic databases

MaxQBiQ9P789.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBP35G2.14.1; SPBP35G2.14.1:pep; SPBP35G2.14.
GeneIDi2541323.
KEGGispo:SPBP35G2.14.

Organism-specific databases

EuPathDBiFungiDB:SPBP35G2.14.
PomBaseiSPBP35G2.14.

Phylogenomic databases

InParanoidiQ9P789.
KOiK17974.
OrthoDBiEOG7SR4W6.

Miscellaneous databases

PROiQ9P789.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR012677. Nucleotide-bd_a/b_plait.
IPR033133. PUM-HD.
IPR001313. Pumilio_RNA-bd_rpt.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00806. PUF. 1 hit.
PF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00025. Pumilio. 5 hits.
SM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS50302. PUM. 6 hits.
PS50303. PUM_HD. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Comparative functional genomics of the fission yeasts."
    Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N., Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y., Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K.
    , Bayne E.H., Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G., French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A., Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P., Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R., Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J., Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W., Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.
    Science 332:930-936(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: REVISION OF GENE MODEL.
  3. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  4. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-260; SER-506; SER-511; SER-515 AND THR-554, IDENTIFICATION BY MASS SPECTROMETRY.

Entry informationi

Entry nameiYN8E_SCHPO
AccessioniPrimary (citable) accession number: Q9P789
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: July 11, 2012
Last modified: June 8, 2016
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.