Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q9P6J0 (YHDC_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized transporter C1683.12
Gene names
ORF Names:SPBC1683.12
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) [Reference proteome]
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces ›

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Endoplasmic reticulum. Membrane; Multi-pass membrane protein Potential Ref.2.

Sequence similarities

Belongs to the major facilitator superfamily. Allantoate permease family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Uncharacterized transporter C1683.12
PRO_0000372721

Regions

Transmembrane40 – 5718Helical; Potential
Transmembrane83 – 10321Helical; Potential
Transmembrane109 – 12921Helical; Potential
Transmembrane140 – 16021Helical; Potential
Transmembrane170 – 19021Helical; Potential
Transmembrane205 – 22521Helical; Potential
Transmembrane278 – 29821Helical; Potential
Transmembrane311 – 33121Helical; Potential
Transmembrane338 – 35821Helical; Potential
Transmembrane366 – 38621Helical; Potential
Transmembrane399 – 41820Helical; Potential
Transmembrane428 – 44821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q9P6J0 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 6102A3452D97987A

FASTA48254,199
        10         20         30         40         50         60 
MSTMEEEKVI SKSTSVDISE GTFDDITIEK KEEAKLVRKL DWYLMPMFSV LYFLSFLDRA 

        70         80         90        100        110        120 
NIGNAAVVGL KEDLKLQAYQ YSAAVSVFYA TYITAETPSV LLVKKFGPHY YLSAMIIGWS 

       130        140        150        160        170        180 
LVTIFTCFVR HYWSLVLTRL LLGICEGGFF PCLSLYISMT YKREEQGKRL AYLYVCSCFS 

       190        200        210        220        230        240 
GAFGGLIATG LTKIPKSSGL PNWGWLYIIE GLISAISALW ILFCLPDDPS TARFLNPREK 

       250        260        270        280        290        300 
ELMKIRAEQR QKYMGSPNFD WTQFRKAFKD PKMYMSCVIQ FCQDLVLYGI STFLPSILKL 

       310        320        330        340        350        360 
ELGYSSLAAQ YMSVPVYALG GISVYVICLL SDRTNIRGWF IIGMNFFGLA GFIILLATTN 

       370        380        390        400        410        420 
SAANYVATYL IALPLYPTVA LNITWINNNM APHYRRATAL GCNQTIGNLA GVIAGQVYRS 

       430        440        450        460        470        480 
SPYKLGHGFA LGCTVVGTLT ATAMRFYLQR QNKIKQEILN GERVDEKKER DGCDALDFVY 


VL

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.
[2]"ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329671 Genomic DNA. Translation: CAB91174.1.
RefSeqNP_595068.1. NM_001020974.2.

3D structure databases

ProteinModelPortalQ9P6J0.
ModBaseSearch...

Protein-protein interaction databases

STRING4896.SPBC1683.12-1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPBC1683.12.1; SPBC1683.12.1:pep; SPBC1683.12.
GeneID2539910.
KEGGspo:SPBC1683.12.

Organism-specific databases

PomBaseSPBC1683.12.

Phylogenomic databases

eggNOGCOG0477.
HOGENOMHOG000167306.
OMAQYMSVPV.
OrthoDBEOG4NGKW3.

Family and domain databases

InterProIPR011701. MFS.
IPR020846. MFS_dom.
IPR016196. MFS_dom_general_subst_transpt.
[Graphical view]
PfamPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMSSF103473. MFS_gen_substrate_transporter. 1 hit.
PROSITEPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20801054.

Entry information

Entry nameYHDC_SCHPO
AccessionPrimary (citable) accession number: Q9P6J0
Entry history
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: October 1, 2000
Last modified: April 3, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents