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Protein

Uncharacterized RNA-binding protein C328.05

Gene

SPAC328.05

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized RNA-binding protein C328.05
Gene namesi
ORF Names:SPAC328.05
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC328.05
PomBaseiSPAC328.05

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003108151 – 464Uncharacterized RNA-binding protein C328.05Add BLAST464

Proteomic databases

MaxQBiQ9P3U1
PaxDbiQ9P3U1
PRIDEiQ9P3U1

PTM databases

iPTMnetiQ9P3U1

Interactioni

Protein-protein interaction databases

BioGridi279023, 18 interactors
STRINGi4896.SPAC328.05.1

Structurei

3D structure databases

ProteinModelPortaliQ9P3U1
SMRiQ9P3U1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini77 – 154RRM 1PROSITE-ProRule annotationAdd BLAST78
Domaini179 – 256RRM 2PROSITE-ProRule annotationAdd BLAST78
Domaini310 – 387RRM 3PROSITE-ProRule annotationAdd BLAST78

Keywords - Domaini

Repeat

Phylogenomic databases

InParanoidiQ9P3U1
OMAiMDIDDYS
OrthoDBiEOG092C5H62

Family and domain databases

Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SUPFAMiSSF54928 SSF54928, 3 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

Q9P3U1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKPIEWNEF DSGMGSKLDV SSSLNSSSSN MDRDRSESPK RHVNGSNSLK
60 70 80 90 100
RGLHFDGEHT ERDPHLGNGQ KYTQQERRVY VGNLSYQVRW FELKEFMGQV
110 120 130 140 150
GNVLNCEILN LPNGLSKGCA IIEYSTAEEA RTAIKTLSNQ KFMGRLVYIR
160 170 180 190 200
EDREQNARFG SSSVSPSASS NGKDSEPDRQ LFVGNLPYNV RWQDLKDLFR
210 220 230 240 250
QAGSVIRADI QMNQEGRSRG IGIVVMSSMK EAMHAIQMLH NTDFMGRTLE
260 270 280 290 300
VRLDRFAHHK SKPYSTHGNG YTFPAEMQMT TSSTYLPMLG ANTQVEDLVY
310 320 330 340 350
HAYPHGPCSD CIYVGNLPWA TSDRNLLDLF TDIGSVIRAR IAYEPTGRSK
360 370 380 390 400
GFGVVQFENE NDAASSIEKL NGYRYGGRPL QLSYAHYATP LPAVPTVLSG
410 420 430 440 450
LPSVAYTPPV MHIPTTNSPL TPQSFTNSFL GYLPISMPVA NMPAIAPISV
460
ALPENNIEHS LEPS
Length:464
Mass (Da):51,594
Last modified:June 13, 2012 - v3
Checksum:i7C83EA35F9E68456
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB96000.3
RefSeqiNP_594207.3, NM_001019630.3

Genome annotation databases

EnsemblFungiiSPAC328.05.1; SPAC328.05.1:pep; SPAC328.05
GeneIDi2542567
KEGGispo:SPAC328.05

Entry informationi

Entry nameiYKX5_SCHPO
AccessioniPrimary (citable) accession number: Q9P3U1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: June 13, 2012
Last modified: March 28, 2018
This is version 108 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

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