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Q9P378 (GAS1_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
1,3-beta-glucanosyltransferase gas1

EC=2.4.1.-
Gene names
Name:gas1
ORF Names:SPAC19B12.02c
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Splits internally a 1,3-beta-glucan molecule and transfers the newly generated reducing end (the donor) to the non-reducing end of another 1,3-beta-glucan molecule (the acceptor) forming a 1,3-beta linkage, resulting in the elongation of 1,3-beta-glucan chains in the cell wall By similarity.

Subcellular location

Secretedcell wall. Membrane; Lipid-anchorGPI-anchor. Note: Covalently-linked GPI-modified cell wall protein (GPI-CWP). Ref.3

Post-translational modification

The GPI-anchor is attached to the protein in the endoplasmic reticulum and serves to target the protein to the cell surface. There, the glucosamine-inositol phospholipid moiety is cleaved off and the GPI-modified mannoprotein is covalently attached via its lipidless GPI glycan remnant to the 1,6-beta-glucan of the outer cell wall layer.

Sequence similarities

Belongs to the glycosyl hydrolase 72 family.

Ontologies

Keywords
   Biological processCell wall biogenesis/degradation
   Cellular componentCell wall
Membrane
Secreted
   DomainSignal
   Molecular functionTransferase
   PTMDisulfide bond
GPI-anchor
Glycoprotein
Lipoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processbarrier septum assembly

Inferred from mutant phenotype. Source: BHF-UCL

cell morphogenesis

Inferred from mutant phenotype. Source: BHF-UCL

cell wall (1->3)-beta-D-glucan metabolic process

Inferred from mutant phenotype. Source: BHF-UCL

cellular cell wall organization

Inferred from electronic annotation. Source: UniProtKB-KW

establishment or maintenance of cell polarity

Inferred from mutant phenotype. Source: BHF-UCL

fungal-type cell wall assembly

Inferred from mutant phenotype. Source: BHF-UCL

fungal-type cell wall polysaccharide metabolic process

Inferred by curator. Source: GeneDB_Spombe

   Cellular componentanchored to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

cell septum edging

Inferred from direct assay. Source: BHF-UCL

external side of plasma membrane

Non-traceable author statement. Source: GeneDB_Spombe

extracellular region

Inferred from electronic annotation. Source: UniProtKB-KW

primary cell septum

Inferred from direct assay. Source: BHF-UCL

site of polarized growth

Inferred from direct assay. Source: BHF-UCL

   Molecular function1,3-beta-glucanosyltransferase activity

Inferred from direct assay. Source: BHF-UCL

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential
Chain20 – 5164971,3-beta-glucanosyltransferase gas1
PRO_0000010491
Propeptide517 – 54226Removed in mature form Potential
PRO_0000377426

Regions

Region115 – 1239Donor substrate binding By similarity
Compositional bias434 – 51683Ser-rich

Sites

Active site1571Proton donor By similarity
Active site2581Nucleophile By similarity
Binding site881Donor substrate; via carbonyl oxygen By similarity
Binding site1561Donor substrate By similarity
Binding site1571Acceptor substrate By similarity
Binding site1981Acceptor substrate; via carbonyl oxygen By similarity
Binding site2031Acceptor substrate By similarity
Binding site2901Donor substrate By similarity

Amino acid modifications

Lipidation5161GPI-anchor amidated serine Potential
Glycosylation351N-linked (GlcNAc...) Potential
Glycosylation911N-linked (GlcNAc...) Potential
Glycosylation1611N-linked (GlcNAc...) Potential
Glycosylation2491N-linked (GlcNAc...) Potential
Glycosylation2791N-linked (GlcNAc...) Potential
Glycosylation4061N-linked (GlcNAc...) Potential
Glycosylation4841N-linked (GlcNAc...) Potential
Glycosylation5021N-linked (GlcNAc...) Potential
Glycosylation5091N-linked (GlcNAc...) Potential
Disulfide bond70 ↔ 99 By similarity
Disulfide bond230 ↔ 261 By similarity
Disulfide bond367 ↔ 419 By similarity
Disulfide bond376 ↔ 439 By similarity
Disulfide bond395 ↔ 400 By similarity

Experimental info

Sequence conflict268 – 27811TFSEIVALFSD → HSLSLLPRSET Ref.2
Sequence conflict285 – 2939SGGIAYQYF → VWWHCLPIW in BAA13864. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q9P378 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 1D243FDA5AD2EC3A

FASTA54258,116
        10         20         30         40         50         60 
MKFSILSLAV AGLVGLAKAS VSPVHVDGRY FFYENGTRFF LKGIAYQPNV DDSDTEGTLF 

        70         80         90        100        110        120 
VDPLSDGDAC SRDVPYFQEL SVNAIRVYAV NASLDHSACM QAFQDAGIYV LSDLAQPYEA 

       130        140        150        160        170        180 
ISSSDPTWTV DLFSRYTEVV DSLAPYDNML GFIAGNEVIQ NNTNTNAAAF VKAAVRDVKS 

       190        200        210        220        230        240 
YIKSSGYRQI PVGYSTNDEE VTRDPMAYYF DCGDDDDHVD FYGINIYEWC GDSDFVSSGY 

       250        260        270        280        290        300 
QERTEEFSNM TVPMIFSEFG CIEVRPRTFS EIVALFSDNM TDVWSGGIAY QYFESENEYG 

       310        320        330        340        350        360 
VVTVSGDSVS TLTDFPYLSS RYASVIPSAS YESTMSATLT ATMSCQATNS AWMAATSLPP 

       370        380        390        400        410        420 
TPSEAVCECM DSTRSCVIND DVSSDDYSDL FSYVCNEISC DGITANGTYP GQYGSYSYCD 

       430        440        450        460        470        480 
AKQQLDYVLD AYYSAKGDCD FSGSATLVSA SSATGTCASY LSAAGSSATN AISLTADSNA 

       490        500        510        520        530        540 
VSRNSSASTM STSYTSGSGS SNSSGSSSNS SSKSSSGASS YNLNMVITFL SVVIGGTAVL 


FI 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed: 11859360] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.
[2]"Identification of open reading frames in Schizosaccharomyces pombe cDNAs."
Yoshioka S., Kato K., Nakai K., Okayama H., Nojima H.
DNA Res. 4:363-369(1997) [PubMed: 9501991] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 268-542.
Strain: PR745.
[3]"Mass spectrometric identification of covalently bound cell wall proteins from the fission yeast Schizosaccharomyces pombe."
de Groot P.W.J., Yin Q.Y., Weig M., Sosinska G.J., Klis F.M., de Koster C.G.
Yeast 24:267-278(2007) [PubMed: 17230583] [Abstract]
Cited for: SUBCELLULAR LOCATION, IDENTIFICATION BY MASS SPECTROMETRY, PROBABLE GPI-ANCHOR.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU329670 Genomic DNA. Translation: CAC00550.1.
D89203 mRNA. Translation: BAA13864.1.
PIRT43004.
RefSeqNP_594765.1. NM_001020192.1.

3D structure databases

ProteinModelPortalQ9P378.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH72. Glycoside Hydrolase Family 72.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPAC19B12.02c.1; SPAC19B12.02c.1:pep; SPAC19B12.02c.
GeneID2542584.
GenomeReviewsGene locus gas1 in contig CU329670_GR.
KEGGspo:SPAC19B12.02c.
NMPDRfig|4896.1.peg.4735.

Organism-specific databases

GeneDB_SpombeSPAC19B12.02c.

Phylogenomic databases

eggNOGfuNOG06278.
GeneTreeEFGT00050000000135.
HOGENOMHBG737647.
OMAYGCNEVT.
OrthoDBEOG4617C9.

Enzyme and pathway databases

BioCycSPOM-XXX-01:SPOM-XXX-01-002840-MONOMER.

Gene expression databases

ArrayExpressQ9P378.

Family and domain databases

InterProIPR004886. GAS1.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF03198. Glyco_hydro_72. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGAS1_SCHPO
AccessionPrimary (citable) accession number: Q9P378
Secondary accession number(s): P78853
Entry history
Integrated into UniProtKB/Swiss-Prot: May 16, 2003
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families