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Protein

Signal recognition particle subunit srp14

Gene

srp14

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding

Enzyme and pathway databases

BRENDAi3.6.5.4. 5613.

Names & Taxonomyi

Protein namesi
Recommended name:
Signal recognition particle subunit srp14
Alternative name(s):
Signal recognition particle 14 kDa protein homolog
Gene namesi
Name:srp14
ORF Names:SPAC19B12.09
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC19B12.09.
PomBaseiSPAC19B12.09. srp14.

Subcellular locationi

GO - Cellular componenti

  • nucleolus Source: PomBase
  • nucleus Source: PomBase
  • signal recognition particle, endoplasmic reticulum targeting Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Signal recognition particle

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 106106Signal recognition particle subunit srp14PRO_0000135195Add
BLAST

Proteomic databases

MaxQBiQ9P372.

Interactioni

Subunit structurei

Fungal signal recognition particle consists of a 7S RNA molecule (scR1) and at least six protein subunits: srp72, srp68, srp54, sec65, srp21 and srp14.By similarity

Protein-protein interaction databases

MINTiMINT-4703537.

Structurei

Secondary structure

1
106
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi5 – 1713Combined sources
Beta strandi30 – 367Combined sources
Beta strandi45 – 517Combined sources
Beta strandi57 – 637Combined sources
Helixi64 – 663Combined sources
Helixi67 – 8216Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2W9JX-ray2.60A/B1-91[»]
ProteinModelPortaliQ9P372.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9P372.

Family & Domainsi

Sequence similaritiesi

Belongs to the SRP14 family.Curated

Phylogenomic databases

HOGENOMiHOG000184883.
InParanoidiQ9P372.
KOiK03104.
OMAiYADVCKA.
OrthoDBiEOG092C5UW9.
PhylomeDBiQ9P372.

Family and domain databases

Gene3Di3.30.720.10. 1 hit.
InterProiIPR003210. Signal_recog_particle_SRP14.
IPR009018. Signal_recog_particle_SRP9/14.
[Graphical view]
PfamiPF02290. SRP14. 1 hit.
[Graphical view]
SUPFAMiSSF54762. SSF54762. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9P372-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLSNEEFLK KLTDLLQTHQ SKGTGSVYLS QKCNPVDEGE GSSASVLIRA
60 70 80 90 100
KSGAAEKIST VVELDYFTDF FQSYAEVCKG QIVGLKKRDR KKTKKNKKKT

TSSGHT
Length:106
Mass (Da):11,718
Last modified:October 1, 2000 - v1
Checksum:iB8E00A3CEFF71B2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAC00557.1.
RefSeqiNP_594772.1. NM_001020199.2.

Genome annotation databases

EnsemblFungiiSPAC19B12.09.1; SPAC19B12.09.1:pep; SPAC19B12.09.
GeneIDi2542565.
KEGGispo:SPAC19B12.09.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAC00557.1.
RefSeqiNP_594772.1. NM_001020199.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2W9JX-ray2.60A/B1-91[»]
ProteinModelPortaliQ9P372.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4703537.

Proteomic databases

MaxQBiQ9P372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC19B12.09.1; SPAC19B12.09.1:pep; SPAC19B12.09.
GeneIDi2542565.
KEGGispo:SPAC19B12.09.

Organism-specific databases

EuPathDBiFungiDB:SPAC19B12.09.
PomBaseiSPAC19B12.09. srp14.

Phylogenomic databases

HOGENOMiHOG000184883.
InParanoidiQ9P372.
KOiK03104.
OMAiYADVCKA.
OrthoDBiEOG092C5UW9.
PhylomeDBiQ9P372.

Enzyme and pathway databases

BRENDAi3.6.5.4. 5613.

Miscellaneous databases

EvolutionaryTraceiQ9P372.
PROiQ9P372.

Family and domain databases

Gene3Di3.30.720.10. 1 hit.
InterProiIPR003210. Signal_recog_particle_SRP14.
IPR009018. Signal_recog_particle_SRP9/14.
[Graphical view]
PfamiPF02290. SRP14. 1 hit.
[Graphical view]
SUPFAMiSSF54762. SSF54762. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiSRP14_SCHPO
AccessioniPrimary (citable) accession number: Q9P372
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 24, 2006
Last sequence update: October 1, 2000
Last modified: September 7, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.