Q9P281 (BAHC1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 54.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: BAH and coiled-coil domain-containing protein 1 Alternative name(s): Bromo adjacent homology domain-containing protein 2 Short name=BAH domain-containing protein 2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2608 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Post-translational modification | Phosphorylated upon DNA damage, probably by ATM or ATR. Ref.5 |
| Sequence similarities | Contains 1 BAH domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Polymorphism |
| Domain | Coiled coil |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular function | DNA binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2608 | 2608 | BAH and coiled-coil domain-containing protein 1 | PRO_0000312118 | |||||
Regions | |||||||||
| Domain | 2482 – 2602 | 121 | BAH | ||||||
| Coiled coil | 1397 – 1442 | 46 | Potential | ||||||
| Compositional bias | 788 – 1028 | 241 | Pro-rich | ||||||
| Compositional bias | 2315 – 2349 | 35 | Ser-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 222 | 1 | N6-acetyllysine Ref.6 | ||||||
| Modified residue | 1200 | 1 | Phosphoserine Ref.5 | ||||||
Natural variations | |||||||||
| Natural variant | 272 | 1 | A → T. Corresponds to variant rs12952981 [ dbSNP | Ensembl ]. | VAR_061559 | |||||
| Natural variant | 1137 | 1 | T → A. Ref.3 Corresponds to variant rs7213444 [ dbSNP | Ensembl ]. | VAR_059589 | |||||
| Natural variant | 1403 | 1 | R → Q. Corresponds to variant rs35572189 [ dbSNP | Ensembl ]. | VAR_061560 | |||||
| Natural variant | 1647 | 1 | T → A. Ref.3 Corresponds to variant rs12601317 [ dbSNP | Ensembl ]. | VAR_061561 | |||||
| Natural variant | 1998 | 1 | V → I. Corresponds to variant rs34680524 [ dbSNP | Ensembl ]. | VAR_061562 | |||||
| Natural variant | 2479 | 1 | R → C. Corresponds to variant rs8746 [ dbSNP | Ensembl ]. | VAR_050685 | |||||
Experimental info | |||||||||
| Sequence conflict | 61 – 120 | 60 | SSRLM…HSHEA → CWRLQGNPAAVLCVSPFITS WLGNNRKWHFSGGRSLPFQP AVTCAGPSPFLGYYSLSQPP in AC110285. Ref.1 | ||||||
| Sequence conflict | 1054 | 1 | P → PVARAHSVAHAGLEFLASND PSTSASQSFGIT in BAA95971. Ref.3 | ||||||
| Sequence conflict | 1621 | 1 | N → S in BAA95971. Ref.3 | ||||||
Sequences
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References
| [1] | "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage." Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. Nusbaum C.Nature 440:1045-1049(2006) [PubMed: 16625196] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O. DNA Res. 7:143-150(2000) [PubMed: 10819331] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 745-2434, VARIANTS ALA-1137 AND ALA-1647. Tissue: Brain. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2420-2608. Tissue: Pancreas. |
| [5] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed: 17525332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1200, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [6] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-222, MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AC110285 Genomic DNA. No translation available. AC139149 Genomic DNA. No translation available. AADB02019016 Genomic DNA. No translation available. AB040880 mRNA. Translation: BAA95971.1. BC033222 mRNA. Translation: AAH33222.1. |
| IPI | IPI00845508. |
| RefSeq | NP_001073988.2. NM_001080519.2. |
| UniGene | Hs.514580. |
3D structure databases | |
| ProteinModelPortal | Q9P281. |
| SMR | Q9P281. Positions 2483-2600. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9P281. 3 interactions. |
PTM databases | |
| PhosphoSite | Q9P281. |
Polymorphism databases | |
| DMDM | 205371795. |
Proteomic databases | |
| PRIDE | Q9P281. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000436173; ENSP00000411847; ENSG00000171282. |
| GeneID | 57597. |
| KEGG | hsa:57597. |
Organism-specific databases | |
| CTD | 57597. |
| GeneCards | GC17P079373. |
| H-InvDB | HIX0014249. |
| HGNC | HGNC:29279. BAHCC1. |
| HPA | HPA023386. |
| neXtProt | NX_Q9P281. |
| PharmGKB | PA128394719. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| GeneTree | ENSGT00530000063602. |
| HOGENOM | HBG443884. |
| HOVERGEN | HBG107492. |
| OrthoDB | EOG4R23SX. |
Gene expression databases | |
| ArrayExpress | Q9P281. |
| CleanEx | HS_BAHCC1. |
| Genevestigator | Q9P281. |
Family and domain databases | |
| InterPro | IPR001025. BAH_dom. [Graphical view] |
| Pfam | PF01426. BAH. 1 hit. [Graphical view] |
| SMART | SM00439. BAH. 1 hit. [Graphical view] |
| PROSITE | PS51038. BAH. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | BAHC1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9P281 Secondary accession number(s): Q5U629 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 17 Human chromosome 17: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with