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Protein

Putative uncharacterized protein encoded by RBM12B-AS1

Gene

RBM12B-AS1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein encoded by RBM12B-AS1
Alternative name(s):
RBM12B antisense RNA 1
RBM12B antisense gene protein 1
Gene namesi
Name:RBM12B-AS1
Synonyms:C8orf39
ORF Names:PRO1905
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:28818. RBM12B-AS1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 102102Putative uncharacterized protein encoded by RBM12B-AS1PRO_0000271052Add
BLAST

Proteomic databases

PRIDEiQ9P1G2.

Expressioni

Gene expression databases

BgeeiQ9P1G2.
GenevestigatoriQ9P1G2.

Interactioni

Protein-protein interaction databases

IntActiQ9P1G2. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ9P1G2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG323657.
HOGENOMiHOG000111614.
InParanoidiQ9P1G2.
OMAiLTENTCP.
OrthoDBiEOG7NGQDN.
PhylomeDBiQ9P1G2.

Sequencei

Sequence statusi: Complete.

Q9P1G2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQDFSQHPQ TGIIRRHRFY SPKPLSTTPR GQSFLLSRQA KVATWDPMLS
60 70 80 90 100
PDFQPKSAFK LTWTAQPPCL SVTPSQGQTF HPNSPEGELP PDLTENTCPS

QA
Length:102
Mass (Da):11,378
Last modified:June 13, 2012 - v2
Checksum:iE845FC42499D348C
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti92 – 921D → N in AAF71092 (Ref. 2) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010834 Genomic DNA. No translation available.
AF116672 mRNA. Translation: AAF71092.1.
UniGeneiHs.192788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010834 Genomic DNA. No translation available.
AF116672 mRNA. Translation: AAF71092.1.
UniGeneiHs.192788.

3D structure databases

ProteinModelPortaliQ9P1G2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9P1G2. 1 interaction.

Proteomic databases

PRIDEiQ9P1G2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiGC08P094754.
HGNCiHGNC:28818. RBM12B-AS1.
neXtProtiNX_Q9P1G2.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG323657.
HOGENOMiHOG000111614.
InParanoidiQ9P1G2.
OMAiLTENTCP.
OrthoDBiEOG7NGQDN.
PhylomeDBiQ9P1G2.

Gene expression databases

BgeeiQ9P1G2.
GenevestigatoriQ9P1G2.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "DNA sequence and analysis of human chromosome 8."
    Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
    , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Gloeckner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C.J., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
    Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Functional prediction of the coding sequences of 121 new genes deduced by analysis of cDNA clones from human fetal liver."
    Zhang C., Yu Y., Zhang S., Wei H., Zhou G., Ouyang S., Luo L., Bi J., Liu M., He F.
    Submitted (DEC-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Fetal liver.

Entry informationi

Entry nameiRBAS1_HUMAN
AccessioniPrimary (citable) accession number: Q9P1G2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: June 13, 2012
Last modified: January 7, 2015
This is version 49 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Product of a dubious CDS prediction.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 8
    Human chromosome 8: entries, gene names and cross-references to MIM

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.