Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

SCAN-related protein RAZ1

Gene

RAZ1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • DNA binding Source: UniProtKB
  • identical protein binding Source: UniProtKB
  • RNA binding Source: UniProtKB
  • transcription factor activity, sequence-specific DNA binding Source: UniProtKB

GO - Biological processi

  • apoptotic process Source: UniProtKB
  • granulocyte differentiation Source: UniProtKB
  • regulation of cell proliferation Source: UniProtKB
  • regulation of transcription, DNA-templated Source: UniProtKB
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SCAN-related protein RAZ1Imported
Gene namesi
Name:RAZ1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: UniProtKB
Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA34979.

PTM / Processingi

Proteomic databases

PaxDbiQ9NZG6.

Expressioni

Gene expression databases

BgeeiQ9NZG6.
GenevisibleiQ9NZG6. HS.

Interactioni

GO - Molecular functioni

  • identical protein binding Source: UniProtKB

Protein-protein interaction databases

STRINGi9606.ENSP00000301995.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini146 – 20459SCAN boxInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains SCAN box domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000293234.
HOVERGENiHBG079091.

Family and domain databases

InterProiIPR008916. Retrov_capsid_C.
IPR003309. SCAN_dom.
[Graphical view]
PfamiPF02023. SCAN. 1 hit.
[Graphical view]
SMARTiSM00431. SCAN. 1 hit.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
PROSITEiPS50804. SCAN_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9NZG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GRREARDFRF RLPQALRWCR RSAEHTATGQ RVTPGAGVMA ATEPILAATG
60 70 80 90 100
SPAAVPPEKL EGAGSSSAPE RNCVGSSLPE ASPPAPEPSS PNAAVPEAIP
110 120 130 140 150
TPRAAASAAL ELPLGPAPVS VAPQAEAEAR STPGPAGSRL GPETFRQRFR
160 170 180 190 200
QFRYQDAAGP REAFRQLREL SRQWLRPDIR TKEQIVEMLV QEQLLAILPE
210
AARARRIRRR TDVRITG
Length:217
Mass (Da):23,431
Last modified:October 1, 2000 - v1
Checksum:iE087141B54222401
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF207829 mRNA. Translation: AAF66832.1.
RefSeqiNP_057642.1. NM_016558.3.
NP_361012.2. NM_033630.2.
UniGeneiHs.584909.

Genome annotation databases

GeneIDi51282.
KEGGihsa:51282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF207829 mRNA. Translation: AAF66832.1.
RefSeqiNP_057642.1. NM_016558.3.
NP_361012.2. NM_033630.2.
UniGeneiHs.584909.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000301995.

Proteomic databases

PaxDbiQ9NZG6.

Protocols and materials databases

DNASUi51282.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi51282.
KEGGihsa:51282.

Organism-specific databases

CTDi51282.
PharmGKBiPA34979.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000293234.
HOVERGENiHBG079091.

Miscellaneous databases

ChiTaRSiSCAND1. human.
GenomeRNAii51282.

Gene expression databases

BgeeiQ9NZG6.
GenevisibleiQ9NZG6. HS.

Family and domain databases

InterProiIPR008916. Retrov_capsid_C.
IPR003309. SCAN_dom.
[Graphical view]
PfamiPF02023. SCAN. 1 hit.
[Graphical view]
SMARTiSM00431. SCAN. 1 hit.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
PROSITEiPS50804. SCAN_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Identification of a novel SCAN box-related protein that interacts with MZF1B. The leucine-rich SCAN box mediates hetero- and homoprotein associations."
    Sander T.L., Haas A.L., Peterson M.J., Morris J.F.
    J. Biol. Chem. 275:12857-12867(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Bone marrowImported.

Entry informationi

Entry nameiQ9NZG6_HUMAN
AccessioniPrimary (citable) accession number: Q9NZG6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: June 8, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.