Q9NZB2 (F120A_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 101.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Constitutive coactivator of PPAR-gamma-like protein 1 Alternative name(s): Oxidative stress-associated Src activator Protein FAM120A | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1118 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May participate in mRNA transport in the cytoplasm By similarity. Critical component of the oxidative stress-induced survival signaling. Activates src family kinases and acts as a scaffolding protein enabling src family kinases to phosphorylate and activate PI3-kinase. Binds RNA and promotes the secretion of IGF-II. May play a pivotal role in the progression of scirrhous-type gastric cancer by supporting cancer cell survival in environments with various oxidative stresses. Ref.10 |
| Subunit structure | Interacts with PURA By similarity. Interacts with YES1, SRC, FYN. Upon tyrosine phosphorylation, interacts with PIK3R1. Ref.10 |
| Subcellular location | Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note: Translocates to plasma membrane upon ultraviolet exposure. Ref.10 |
| Tissue specificity | Ubiquitously expressed. Highly expressed in scirrhous-type gastric cancer tissues compared with normal gastric mucosa (at protein level). Ref.6 Ref.10 |
| Post-translational modification | Arg-982 is dimethylated, probably to asymmetric dimethylarginine. Phosphorylated on tyrosine by src family kinases upon ultraviolet exposure. |
| Sequence similarities | Belongs to the constitutive coactivator of PPAR-gamma family. |
| Sequence caution | The sequence AAF72866.1 differs from that shown. Reason: Frameshift at position 1055. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cell membrane Cytoplasm Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Disease | Tumor suppressor |
| Ligand | RNA-binding |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular_component | cytoplasm Inferred from direct assay. Source: HPA plasma membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | RNA binding Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform A (identifier: Q9NZB2-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform B (identifier: Q9NZB2-2) The sequence of this isoform differs from the canonical sequence as follows: 579-628: GEIKIAVSIE...SRKKTERLAF → VLSKGPWSGF...KFTFPFLNIE 629-1118: Missing. | ||||||
| Isoform D (identifier: Q9NZB2-4) The sequence of this isoform differs from the canonical sequence as follows: 890-935: Missing. | ||||||
| Isoform E (identifier: Q9NZB2-5) The sequence of this isoform differs from the canonical sequence as follows: 637-651: FSPVIIKEWAAYKGK → CMYCNNPLFVFLGTS 652-1118: Missing. | ||||||
| Isoform F (identifier: Q9NZB2-6) The sequence of this isoform differs from the canonical sequence as follows: 473-473: N → KPFQLYLQKNFVFHKENSIVLCSRILRHG |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1118 | 1118 | Constitutive coactivator of PPAR-gamma-like protein 1 | PRO_0000221627 | |||||
Regions | |||||||||
| Region | 339 – 405 | 67 | Interaction with YES1, SRC and FYN | ||||||
| Region | 829 – 1118 | 290 | RNA binding | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1023 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 1044 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 1045 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 1048 | 1 | Phosphoserine Ref.11 | ||||||
Natural variations | |||||||||
| Alternative sequence | 473 | 1 | N → KPFQLYLQKNFVFHKENSIV LCSRILRHG in isoform F. | VSP_036324 | |||||
| Alternative sequence | 579 – 628 | 50 | GEIKI…ERLAF → VLSKGPWSGFCYLMSGHSYG CFVLLSFFEPFFCLTNLLET KFTFPFLNIE in isoform B. | VSP_004147 | |||||
| Alternative sequence | 629 – 1118 | 490 | Missing in isoform B. | VSP_004148 | |||||
| Alternative sequence | 637 – 651 | 15 | FSPVI…AYKGK → CMYCNNPLFVFLGTS in isoform E. | VSP_017278 | |||||
| Alternative sequence | 652 – 1118 | 467 | Missing in isoform E. | VSP_017279 | |||||
| Alternative sequence | 890 – 935 | 46 | Missing in isoform D. | VSP_017280 | |||||
| Natural variant | 327 | 1 | Y → H. Corresponds to variant rs11541747 [ dbSNP | Ensembl ]. | VAR_054400 | |||||
Experimental info | |||||||||
| Sequence conflict | 517 – 520 | 4 | EGKG → DSRR in AAF72867. Ref.1 | ||||||
| Sequence conflict | 556 | 1 | L → V in AAF72867. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Generating full-length coding sequence for 2 alternate transcripts of a novel gene C9orf10 and screening HSN-I patients for mutations." Brahmbhatt S.B., Hulme D.J., Dawkins J.L., Nicholson G.A. Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM B), NUCLEOTIDE SEQUENCE [MRNA] OF 1-1102 (ISOFORM A). |
| [2] | "DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. Dunham I.Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM A), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 157-1118 (ISOFORM E). Tissue: Lung and Placenta. |
| [4] | "Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1." Nagase T., Seki N., Ishikawa K., Tanaka A., Nomura N. DNA Res. 3:17-24(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-1069 (ISOFORM A). Tissue: Bone marrow. |
| [5] | Ohara O., Nagase T., Kikuno R., Nomura N. Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [6] | "The human gene CXorf17 encodes a member of a novel family of putative transmembrane proteins: cDNA cloning and characterization of CXorf17 and its mouse ortholog orf34." Holden S., Raymond F.L. Gene 318:149-161(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 393-512 (ISOFORM F), TISSUE SPECIFICITY. |
| [7] | Yu W., Gibbs R.A. Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 579-1069 (ISOFORM D). Tissue: Brain. |
| [8] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1023, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [10] | "A novel RNA-binding protein, Ossa/C9orf10, regulates activity of Src kinases to protect cells from oxidative stress-induced apoptosis." Tanaka M., Sasaki K., Kamata R., Hoshino Y., Yanagihara K., Sakai R. Mol. Cell. Biol. 29:402-413(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH YES1; SRC AND FYN, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. |
| [11] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1044; SER-1045 AND SER-1048, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [12] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF214737 mRNA. Translation: AAF72866.1. Frameshift. AF214738 mRNA. Translation: AAF72867.1. AL353629 Genomic DNA. Translation: CAI96105.1. AL353629 Genomic DNA. Translation: CAI96106.1. AL353629 Genomic DNA. Translation: CAI96108.1. AL353629 Genomic DNA. Translation: CAI96109.1. BC007879 mRNA. Translation: AAH07879.2. BC098584 mRNA. Translation: AAH98584.1. BC111736 mRNA. Translation: AAI11737.1. D80005 mRNA. Translation: BAA11500.2. AY266457 mRNA. Translation: AAP31031.1. AF055017 mRNA. Translation: AAC09364.1. |
| IPI | IPI00039626. IPI00220935. IPI00384265. IPI00472054. IPI00719085. |
| RefSeq | NP_055427.2. NM_014612.3. |
| UniGene | Hs.372003. Hs.707324. Hs.738743. |
3D structure databases | |
| ProteinModelPortal | Q9NZB2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9NZB2. 7 interactions. |
PTM databases | |
| PhosphoSite | Q9NZB2. |
Polymorphism databases | |
| DMDM | 158523294. |
Proteomic databases | |
| PaxDb | Q9NZB2. |
| PRIDE | Q9NZB2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000277165; ENSP00000277165; ENSG00000048828. ENST00000333936; ENSP00000334918; ENSG00000048828. ENST00000340893; ENSP00000344698; ENSG00000048828. ENST00000375389; ENSP00000364538; ENSG00000048828. ENST00000427765; ENSP00000412440; ENSG00000048828. |
| GeneID | 23196. |
| KEGG | hsa:23196. |
| UCSC | uc004atv.3. human. uc004atw.3. human. uc004atx.3. human. |
Organism-specific databases | |
| CTD | 23196. |
| GeneCards | GC09P096214. |
| HGNC | HGNC:13247. FAM120A. |
| HPA | HPA019734. |
| MIM | 612265. gene. |
| neXtProt | NX_Q9NZB2. |
| PharmGKB | PA134954136. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG40155. |
| HOVERGEN | HBG050957. |
| InParanoid | Q9NZB2. |
| OMA | EKPAPQM. |
| OrthoDB | EOG4R7V91. |
| PhylomeDB | Q9NZB2. |
Gene expression databases | |
| Bgee | Q9NZB2. |
| Genevestigator | Q9NZB2. |
| GermOnline | ENSG00000048828. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR026783. Coact_PPARg-like_1. [Graphical view] |
| PANTHER | PTHR15976:SF4. PTHR15976:SF4. 1 hit. |
| ProtoNet | Search... |
Other | |
| ChiTaRS | FAM120A. human. |
| GenomeRNAi | 23196. |
| NextBio | 44699. |
| SOURCE | Search... |
Entry information
| Entry name | F120A_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9NZB2 Secondary accession number(s): A6NGU0 Q9NZB1 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 9 Human chromosome 9: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
