Q9NYP7 (ELOV5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 94.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Elongation of very long chain fatty acids protein 5 EC=2.3.1.199 Alternative name(s): 3-keto acyl-CoA synthase ELOVL5 ELOVL fatty acid elongase 5 Short name=ELOVL FA elongase 5 Fatty acid elongase 1 Short name=hELO1 Very-long-chain 3-oxoacyl-CoA synthase 5 | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 299 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Condensing enzyme that catalyzes the synthesis of monounsaturated and of polyunsaturated very long chain fatty acids Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. Ref.1 Ref.13 |
| Catalytic activity | A very-long-chain acyl-CoA + malonyl-CoA = CoA + a very-long-chain 3-oxoacyl-CoA + CO2. |
| Subcellular location | Endoplasmic reticulum membrane; Multi-pass membrane protein Ref.13. |
| Tissue specificity | Ubiquitous. Highly expressed in the adrenal gland and testis. Weakly expressed in prostate, lung and brain. Ref.1 Ref.13 |
| Sequence similarities | Belongs to the ELO family. |
| Sequence caution | The sequence AAF16688.1 differs from that shown. Reason: Erroneous initiation. The sequence BAC11178.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9NYP7-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9NYP7-2) The sequence of this isoform differs from the canonical sequence as follows: 82-82: E → ESKREQPRRSACASRTDPSTQQQLPENR | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q9NYP7-3) The sequence of this isoform differs from the canonical sequence as follows: 20-88: DTRVKGWFLL...MFCELVTGVW → GISSSVLRMG...LATIASHAPA 89-299: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 299 | 299 | Elongation of very long chain fatty acids protein 5 | PRO_0000282838 | |||||
Regions | |||||||||
| Transmembrane | 26 – 46 | 21 | Helical; Potential | ||||||
| Transmembrane | 64 – 84 | 21 | Helical; Potential | ||||||
| Transmembrane | 112 – 132 | 21 | Helical; Potential | ||||||
| Transmembrane | 139 – 158 | 20 | Helical; Potential | ||||||
| Transmembrane | 168 – 187 | 20 | Helical; Potential | ||||||
| Transmembrane | 205 – 225 | 21 | Helical; Potential | ||||||
| Transmembrane | 226 – 246 | 21 | Helical; Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 273 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 281 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 283 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 285 | 1 | Phosphoserine Ref.14 | ||||||
Natural variations | |||||||||
| Alternative sequence | 20 – 88 | 69 | DTRVK…VTGVW → GISSSVLRMGPPLHTVVGWL QQLQAAHSEEEEKMFHLCGF KHKEVVSQSSLPAVIPQNSL ATIASHAPA in isoform 3. | VSP_045917 | |||||
| Alternative sequence | 82 | 1 | E → ESKREQPRRSACASRTDPST QQQLPENR in isoform 2. | VSP_045918 | |||||
| Alternative sequence | 89 – 299 | 211 | Missing in isoform 3. | VSP_045919 | |||||
Experimental info | |||||||||
| Sequence conflict | 59 | 1 | F → L in BAG64104. Ref.4 | ||||||
| Sequence conflict | 167 – 262 | 96 | YFGAT…GASRR → SVCADNHPDQLRGHLAVHIP SWLVVFPDWIHDFPDCSLHK LLHSDLQQERGLPKERPPEG PPEWVHGCCEWTHQQLFTPG KQCEAKEAAEGLKSKN in BAD93035. Ref.4 | ||||||
| Sequence conflict | 204 – 206 | 3 | QGQ → EFH in BAC11178. Ref.9 | ||||||
| Sequence conflict | 227 | 1 | F → S in BAC11178. Ref.9 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of a human cDNA encoding a novel enzyme involved in the elongation of long-chain polyunsaturated fatty acids." Leonard A.E., Bobik E.G., Dorado J., Kroeger P.E., Chuang L.-T., Thurmond J.M., Parker-Barnes J.M., Das T., Huang Y.-S., Mukerji P. Biochem. J. 350:765-770(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY, FUNCTION. Tissue: Liver. |
| [2] | "Homo sapiens mRNA for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (ELOVL2)." Suzuki T., Nitta A., Morita R., Sugimoto Y., Yamakawa K. Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [3] | "Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs." Wiemann S., Weil B., Wellenreuther R., Gassenhuber J., Glassl S., Ansorge W., Boecher M., Bloecker H., Bauersachs S., Blum H., Lauber J., Duesterhoeft A., Beyer A., Koehrer K., Strack N., Mewes H.-W., Ottenwaelder B., Obermaier B. Poustka A.Genome Res. 11:422-435(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Uterus. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Testis. |
| [5] | Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., Ohara O., Nagase T., Kikuno R.F. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [6] | "The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. Beck S.Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3). Tissue: Eye, Leiomyosarcoma and Skin. |
| [9] | "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries." Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y. Isogai T.DNA Res. 12:117-126(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 179-299 (ISOFORM 1). |
| [10] | Zhang C., Yu Y., Zhang S., Ouyang S., Luo L., Wei H., Zhou G., Zhang Y., Liu M., He F. Submitted (DEC-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 204-299 (ISOFORM 1). Tissue: Liver. |
| [11] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [12] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [13] | "ELOVL1 production of C24 acyl-CoAs is linked to C24 sphingolipid synthesis." Ohno Y., Suto S., Yamanaka M., Mizutani Y., Mitsutake S., Igarashi Y., Sassa T., Kihara A. Proc. Natl. Acad. Sci. U.S.A. 107:18439-18444(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. |
| [14] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-285, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [15] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF231981 mRNA. Translation: AAF70631.1. AF338241 mRNA. Translation: AAM00193.1. AL136939 mRNA. Translation: CAB66873.1. AK074889 mRNA. Translation: BAC11270.1. AK302948 mRNA. Translation: BAG64104.1. AB209798 mRNA. Translation: BAD93035.1. AL034374 Genomic DNA. Translation: CAI21530.1. AL034374 Genomic DNA. Translation: CAI21531.1. CH471081 Genomic DNA. Translation: EAX04419.1. BC017270 mRNA. Translation: AAH17270.2. BC067123 mRNA. Translation: AAH67123.2. BC074503 mRNA. No translation available. AK074748 mRNA. Translation: BAC11178.1. Different initiation. AF111849 mRNA. Translation: AAF16688.1. Different initiation. |
| IPI | IPI00328307. IPI00513972. IPI00910962. |
| RefSeq | NP_001229757.1. NM_001242828.1. NP_001229759.1. NM_001242830.1. NP_001229760.1. NM_001242831.1. NP_068586.1. NM_021814.4. |
| UniGene | Hs.520189. |
3D structure databases | |
| ProteinModelPortal | Q9NYP7. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 9606.ENSP00000306640. |
PTM databases | |
| PhosphoSite | Q9NYP7. |
Polymorphism databases | |
| DMDM | 74753072. |
Proteomic databases | |
| PaxDb | Q9NYP7. |
| PeptideAtlas | Q9NYP7. |
| PRIDE | Q9NYP7. |
Protocols and materials databases | |
| DNASU | 60481. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000304434; ENSP00000306640; ENSG00000012660. ENST00000370913; ENSP00000359951; ENSG00000012660. ENST00000541407; ENSP00000438095; ENSG00000012660. ENST00000542638; ENSP00000440728; ENSG00000012660. |
| GeneID | 60481. |
| KEGG | hsa:60481. |
| UCSC | uc003pbq.1. human. |
Organism-specific databases | |
| CTD | 60481. |
| GeneCards | GC06M053132. |
| HGNC | HGNC:21308. ELOVL5. |
| HPA | CAB017042. |
| MIM | 611805. gene. |
| neXtProt | NX_Q9NYP7. |
| PharmGKB | PA128394703. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG305096. |
| HOGENOM | HOG000038120. |
| HOVERGEN | HBG051468. |
| KO | K10244. |
| OrthoDB | EOG4J118X. |
| PhylomeDB | Q9NYP7. |
Enzyme and pathway databases | |
| BioCyc | MetaCyc:ENSG00000012660-MONOMER. |
| Reactome | REACT_111217. Metabolism. |
Gene expression databases | |
| ArrayExpress | Q9NYP7. |
| Bgee | Q9NYP7. |
| CleanEx | HS_ELOVL2. HS_ELOVL5. |
| Genevestigator | Q9NYP7. |
Family and domain databases | |
| InterPro | IPR002076. GNS1_SUR4. [Graphical view] |
| PANTHER | PTHR11157. PTHR11157. 1 hit. |
| Pfam | PF01151. ELO. 1 hit. [Graphical view] |
| PROSITE | PS01188. ELO. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| BindingDB | Q9NYP7. |
| ChEMBL | CHEMBL5937. |
| ChiTaRS | ELOVL5. human. |
| GenomeRNAi | 60481. |
| NextBio | 65351. |
| SOURCE | Search... |
Entry information
| Entry name | ELOV5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9NYP7 Secondary accession number(s): B4DZJ2 Q9UI22 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
