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Protein
Submitted name:

Neuronal specific transcription factor DAT1

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Neuronal specific transcription factor DAT1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA30409.

PTM / Processingi

Proteomic databases

PRIDEiQ9NYC6.

Expressioni

Gene expression databases

GenevisibleiQ9NYC6. HS.

Interactioni

Protein-protein interaction databases

MINTiMINT-1439574.

Structurei

3D structure databases

ProteinModelPortaliQ9NYC6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 5343LIM zinc-bindingInterPro annotationAdd
BLAST
Domaini55 – 11763LIM zinc-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 2 LIM zinc-binding domains.UniRule annotation

Keywords - Domaini

LIM domainUniRule annotation

Phylogenomic databases

HOGENOMiHOG000232175.
HOVERGENiHBG054231.

Family and domain databases

Gene3Di2.10.110.10. 2 hits.
InterProiIPR001781. Znf_LIM.
[Graphical view]
PfamiPF00412. LIM. 2 hits.
[Graphical view]
SMARTiSM00132. LIM. 2 hits.
[Graphical view]
PROSITEiPS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9NYC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSVQPDTKP KGCAGCNRKI KDRYLLKALD KYWHEDCPKC ACCDCRWERL
60 70 80 90 100
FGVTGNCAAC SKLIPAFEMV MRAKDNVYHL DCFACQLCNQ RFCVGDKFFL
110 120
KNNMILCQTD YEEGLMKEGY APQVR
Length:125
Mass (Da):14,412
Last modified:October 1, 2000 - v1
Checksum:iBCC1AE33DADA2F75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF258348 mRNA. Translation: AAF71368.1.
RefSeqiNP_001001395.1. NM_001001395.2.
NP_001230538.1. NM_001243609.1.
UniGeneiHs.504908.

Genome annotation databases

GeneIDi55885.
KEGGihsa:55885.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF258348 mRNA. Translation: AAF71368.1.
RefSeqiNP_001001395.1. NM_001001395.2.
NP_001230538.1. NM_001243609.1.
UniGeneiHs.504908.

3D structure databases

ProteinModelPortaliQ9NYC6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-1439574.

Proteomic databases

PRIDEiQ9NYC6.

Protocols and materials databases

DNASUi55885.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi55885.
KEGGihsa:55885.

Organism-specific databases

CTDi55885.
PharmGKBiPA30409.

Phylogenomic databases

HOGENOMiHOG000232175.
HOVERGENiHBG054231.

Miscellaneous databases

GenomeRNAii55885.
NextBioi61212.

Gene expression databases

GenevisibleiQ9NYC6. HS.

Family and domain databases

Gene3Di2.10.110.10. 2 hits.
InterProiIPR001781. Znf_LIM.
[Graphical view]
PfamiPF00412. LIM. 2 hits.
[Graphical view]
SMARTiSM00132. LIM. 2 hits.
[Graphical view]
PROSITEiPS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Identification of dopamine responsive mRNAs in glial cells by suppression subtractive hybridization."
    Shi J., Cai W., Chen X., Ying K., Zhang K., Xie Y.
    Brain Res. 910:29-37(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ9NYC6_HUMAN
AccessioniPrimary (citable) accession number: Q9NYC6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: February 17, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.