SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9NX04

- CA109_HUMAN

UniProt

Q9NX04 - CA109_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Uncharacterized protein C1orf109
Gene
C1orf109
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C1orf109
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:26039. C1orf109.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142672493.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 203203Uncharacterized protein C1orf109
PRO_0000274382Add
BLAST

Proteomic databases

MaxQBiQ9NX04.
PaxDbiQ9NX04.
PRIDEiQ9NX04.

PTM databases

PhosphoSiteiQ9NX04.

Expressioni

Gene expression databases

ArrayExpressiQ9NX04.
BgeeiQ9NX04.
CleanExiHS_C1orf109.
GenevestigatoriQ9NX04.

Organism-specific databases

HPAiHPA027110.
HPA027127.

Interactioni

Protein-protein interaction databases

BioGridi120293. 3 interactions.
IntActiQ9NX04. 4 interactions.
STRINGi9606.ENSP00000350704.

Structurei

3D structure databases

ProteinModelPortaliQ9NX04.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG45850.
HOVERGENiHBG080964.
InParanoidiQ9NX04.
OMAiCFPVVEE.
OrthoDBiEOG7VDXQS.
PhylomeDBiQ9NX04.
TreeFamiTF332524.

Family and domain databases

InterProiIPR029159. CK2S.
[Graphical view]
PfamiPF15011. CK2S. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9NX04-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MTQDRPLLAV QEALKKCFPV VEEQQGLWQS ALRDCQPLLS SLSNLAEQLQ    50
AAQNLRFEDV PALRAFPDLK ERLRRKQLVA GDIVLDKLGE RLAILLKVRD 100
MVSSHVERVF QIYEQHADTV GIDAVLQPSA VSPSVADMLE WLQDIERHYR 150
KSYLKRKYLL SSIQWGDLAN IQALPKAWDR ISKDEHQDLV QDILLNVSFF 200
LEE 203
Length:203
Mass (Da):23,373
Last modified:October 1, 2000 - v1
Checksum:iCBD3883CB1A2C281
GO
Isoform 2 (identifier: Q9NX04-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     75-113: RKQLVAGDIV...SHVERVFQIY → QPSSSRCETW...ALMLSCSLQQ
     114-203: Missing.

Show »
Length:113
Mass (Da):12,861
Checksum:iC243446688C8499F
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei75 – 11339RKQLV…VFQIY → QPSSSRCETWSAAMWSECFR SMSNTQTQLALMLSCSLQQ in isoform 2.
VSP_022733Add
BLAST
Alternative sequencei114 – 20390Missing in isoform 2.
VSP_022734Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK000515 mRNA. Translation: BAA91221.1.
CH471059 Genomic DNA. Translation: EAX07327.1.
CH471059 Genomic DNA. Translation: EAX07329.1.
CH471059 Genomic DNA. Translation: EAX07330.1.
BC018109 mRNA. Translation: AAH18109.1.
BC063843 mRNA. Translation: AAH63843.1.
CCDSiCCDS423.1. [Q9NX04-1]
RefSeqiNP_060320.1. NM_017850.1. [Q9NX04-1]
UniGeneiHs.272673.

Genome annotation databases

EnsembliENST00000358011; ENSP00000350704; ENSG00000116922. [Q9NX04-1]
ENST00000464085; ENSP00000477159; ENSG00000116922. [Q9NX04-1]
ENST00000494120; ENSP00000477273; ENSG00000116922. [Q9NX04-2]
GeneIDi54955.
KEGGihsa:54955.
UCSCiuc001cbp.3. human. [Q9NX04-1]
uc001cbq.1. human. [Q9NX04-2]

Polymorphism databases

DMDMi74761780.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK000515 mRNA. Translation: BAA91221.1 .
CH471059 Genomic DNA. Translation: EAX07327.1 .
CH471059 Genomic DNA. Translation: EAX07329.1 .
CH471059 Genomic DNA. Translation: EAX07330.1 .
BC018109 mRNA. Translation: AAH18109.1 .
BC063843 mRNA. Translation: AAH63843.1 .
CCDSi CCDS423.1. [Q9NX04-1 ]
RefSeqi NP_060320.1. NM_017850.1. [Q9NX04-1 ]
UniGenei Hs.272673.

3D structure databases

ProteinModelPortali Q9NX04.
ModBasei Search...

Protein-protein interaction databases

BioGridi 120293. 3 interactions.
IntActi Q9NX04. 4 interactions.
STRINGi 9606.ENSP00000350704.

PTM databases

PhosphoSitei Q9NX04.

Polymorphism databases

DMDMi 74761780.

Proteomic databases

MaxQBi Q9NX04.
PaxDbi Q9NX04.
PRIDEi Q9NX04.

Protocols and materials databases

DNASUi 54955.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000358011 ; ENSP00000350704 ; ENSG00000116922 . [Q9NX04-1 ]
ENST00000464085 ; ENSP00000477159 ; ENSG00000116922 . [Q9NX04-1 ]
ENST00000494120 ; ENSP00000477273 ; ENSG00000116922 . [Q9NX04-2 ]
GeneIDi 54955.
KEGGi hsa:54955.
UCSCi uc001cbp.3. human. [Q9NX04-1 ]
uc001cbq.1. human. [Q9NX04-2 ]

Organism-specific databases

CTDi 54955.
GeneCardsi GC01M038147.
HGNCi HGNC:26039. C1orf109.
HPAi HPA027110.
HPA027127.
MIMi 614799. gene.
neXtProti NX_Q9NX04.
PharmGKBi PA142672493.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG45850.
HOVERGENi HBG080964.
InParanoidi Q9NX04.
OMAi CFPVVEE.
OrthoDBi EOG7VDXQS.
PhylomeDBi Q9NX04.
TreeFami TF332524.

Miscellaneous databases

GeneWikii C1orf109_(gene).
GenomeRNAii 54955.
NextBioi 58140.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q9NX04.
Bgeei Q9NX04.
CleanExi HS_C1orf109.
Genevestigatori Q9NX04.

Family and domain databases

InterProi IPR029159. CK2S.
[Graphical view ]
Pfami PF15011. CK2S. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
    Tissue: Uterus.

Entry informationi

Entry nameiCA109_HUMAN
AccessioniPrimary (citable) accession number: Q9NX04
Secondary accession number(s): D3DPT1, Q8WVD1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: October 1, 2000
Last modified: July 9, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

External Data

Dasty 3

Similar proteinsi