Reviewed,
UniProtKB/Swiss-Prot Q9NW15 (ANO10_HUMAN)
Last modified
November 24, 2009.
Version 47.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Anoctamin-10 Alternative name(s): Transmembrane protein 16K | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 660 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | May act as a calcium-activated chloride channel. |
| Subcellular location | Membrane; Multi-pass membrane protein Potential. |
| Sequence similarities | Belongs to the anoctamin family. |
| Sequence caution | The sequence BAA91573.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. The sequence BC038855 differs from that shown. Reason: Frameshift at position 42. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Transport |
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Transmembrane |
| Ligand | Calcium Chloride |
| Molecular function | Chloride channel Ionic channel |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | ion transport Inferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | chloride channel complex Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: UniProtKB-KW chloride channel activityInferred from electronic annotation. Source: UniProtKB-KW chloride ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9NW15-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9NW15-2) The sequence of this isoform differs from the canonical sequence as follows: 198-387: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q9NW15-3) The sequence of this isoform differs from the canonical sequence as follows: 47-112: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q9NW15-4) The sequence of this isoform differs from the canonical sequence as follows: 47-158: GAQLLFRPLL...AKLYPGKSLL → V | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 660 | 660 | Anoctamin-10 | PRO_0000289957 | |||||
Regions | |||||||||
| Topological domain | 1 – 207 | 207 | Cytoplasmic Potential | ||||||
| Transmembrane | 208 – 228 | 21 | Potential | ||||||
| Topological domain | 229 – 240 | 12 | Extracellular Potential | ||||||
| Transmembrane | 241 – 261 | 21 | Potential | ||||||
| Topological domain | 262 – 316 | 55 | Cytoplasmic Potential | ||||||
| Transmembrane | 317 – 337 | 21 | Potential | ||||||
| Topological domain | 338 – 352 | 15 | Extracellular Potential | ||||||
| Transmembrane | 353 – 373 | 21 | Potential | ||||||
| Topological domain | 374 – 400 | 27 | Cytoplasmic Potential | ||||||
| Transmembrane | 401 – 421 | 21 | Potential | ||||||
| Topological domain | 422 – 500 | 79 | Extracellular Potential | ||||||
| Transmembrane | 501 – 521 | 21 | Potential | ||||||
| Topological domain | 522 – 553 | 32 | Cytoplasmic Potential | ||||||
| Transmembrane | 554 – 574 | 21 | Potential | ||||||
| Topological domain | 575 – 590 | 16 | Extracellular Potential | ||||||
| Transmembrane | 591 – 611 | 21 | Potential | ||||||
| Topological domain | 612 – 660 | 49 | Cytoplasmic Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 47 – 158 | 112 | GAQLL…GKSLL → V in isoform 4. | VSP_038211 | |||||
| Alternative sequence | 47 – 112 | 66 | Missing in isoform 3. | VSP_038212 | |||||
| Alternative sequence | 198 – 387 | 190 | Missing in isoform 2. | VSP_026033 | |||||
| Natural variant | 462 | 1 | R → Q: dbSNP rs3772165. Ref.1 | VAR_032638 | |||||
| Natural variant | 561 | 1 | T → M: dbSNP rs17409162. Ref.3 | VAR_032639 | |||||
| Natural variant | 583 | 1 | V → A: dbSNP rs17853862. Ref.3 | VAR_032640 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 3 AND 4), VARIANT GLN-462. Tissue: Substantia nigra, Teratocarcinoma, Testis and Urinary bladder. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANTS MET-561 AND ALA-583. Tissue: Leukocyte. |
| [4] | "TMEM16A confers receptor-activated calcium-dependent chloride conductance." Yang Y.D., Cho H., Koo J.Y., Tak M.H., Cho Y., Shim W.-S., Park S.P., Lee J., Lee B., Kim B.-M., Raouf R., Shin Y.K., Oh U. Nature 455:1210-1215(2008) [PubMed: 18724360] [Abstract] Cited for: IDENTIFICATION AS PUTATIVE CHLORIDE CHANNEL. |
Cross-references
Sequence databases | |
|---|---|
| AK001237 mRNA. Translation: BAA91573.1. Sequence problems. AK096302 mRNA. Translation: BAG53253.1. AK131223 mRNA. Translation: BAG54755.1. AK292368 mRNA. Translation: BAF85057.1. AK295969 mRNA. Translation: BAG58745.1. CH471055 Genomic DNA. Translation: EAW64696.1. BC038855 mRNA. No translation available. | |
| IPI | IPI00794169. IPI00797182. IPI00908702. IPI00941544. |
| RefSeq | NP_060545.3. |
| UniGene | Hs.656657 |
3D structure databases | |
| ModBase | Search... |
Proteomic databases | |
| PRIDE | Q9NW15. |
Genome annotation databases | |
| Ensembl | ENST00000292246; ENSP00000292246; ENSG00000160746; Homo sapiens. [Genome view] ENST00000396092; ENSP00000379399; ENSG00000160746; Homo sapiens. [Genome view] ENST00000418371; ENSP00000391537; ENSG00000160746; Homo sapiens. [Genome view] |
| GeneID | 55129. |
| KEGG | hsa:55129. |
| NMPDR | fig|9606.3.peg.22368. |
| UCSC | uc003cmv.1. human. |
Organism-specific databases | |
| CTD | 55129. |
| GeneCards | GC03M043385. |
| HGNC | HGNC:25519. ANO10. |
| PharmGKB | PA142670790. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q9NW15. |
| HOVERGEN | Q9NW15. |
| OMA | HGVLGIN |
| OrthoDB | EOG94F8VN |
Gene expression databases | |
| ArrayExpress | Q9NW15. |
| Bgee | Q9NW15. |
| CleanEx | HS_ANO10. |
| Genevestigator | Q9NW15. |
Family and domain databases | |
| InterPro | IPR007632. DUF590. [Graphical view] |
| PANTHER | PTHR12308. DUF590. 1 hit. |
| Pfam | PF04547. DUF590. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 58794. |
Entry information
| Entry name | ANO10_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9NW15 Secondary accession number(s): A8K8K3 Q8IXX9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 3 Human chromosome 3: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with


