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Protein

Uncharacterized protein C20orf96

Gene

C20orf96

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C20orf96
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

EuPathDBiHostDB:ENSG00000196476.11
HGNCiHGNC:16227 C20orf96
neXtProtiNX_Q9NUD7

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000196476
PharmGKBiPA25803

Polymorphism and mutation databases

BioMutaiC20orf96
DMDMi26392576

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000794501 – 363Uncharacterized protein C20orf96Add BLAST363

Proteomic databases

EPDiQ9NUD7
PaxDbiQ9NUD7
PeptideAtlasiQ9NUD7
PRIDEiQ9NUD7
ProteomicsDBi82665

PTM databases

iPTMnetiQ9NUD7
PhosphoSitePlusiQ9NUD7

Expressioni

Gene expression databases

BgeeiENSG00000196476
CleanExiHS_C20orf96
ExpressionAtlasiQ9NUD7 baseline and differential
GenevisibleiQ9NUD7 HS

Organism-specific databases

HPAiHPA048649

Interactioni

Protein-protein interaction databases

BioGridi126645, 4 interactors

Structurei

3D structure databases

ProteinModelPortaliQ9NUD7
SMRiQ9NUD7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili109 – 329Sequence analysisAdd BLAST221

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi264 – 268Poly-Lys5

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IIXG Eukaryota
ENOG4111YXE LUCA
GeneTreeiENSGT00390000003339
HOGENOMiHOG000112025
HOVERGENiHBG051181
InParanoidiQ9NUD7
OMAiVPWQQSK
OrthoDBiEOG091G0LU4
PhylomeDBiQ9NUD7
TreeFamiTF330721

Family and domain databases

InterProiView protein in InterPro
IPR029236 DUF4618
PANTHERiPTHR28574 PTHR28574, 1 hit
PfamiView protein in Pfam
PF15397 DUF4618, 1 hit

Sequencei

Sequence statusi: Complete.

Q9NUD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHVLQKPKH SGTHSIVQEF QVPDYVPWQQ SKQETKPSTL PPVQQANSLH
60 70 80 90 100
TSKMKTLTRV QPVFHFKPTT VVTSCQPKNP RELHRRRKLD PGKMHAKIWL
110 120 130 140 150
MKTSLRSGRA ALRELRSREN FLSKLNRELI ETIQEMENST TLHVRALLQQ
160 170 180 190 200
QDTLATIIDI LEYSNKKRLQ QLKSELQEWE EKKKCKMSYL EQQAEQLNAK
210 220 230 240 250
IEKTQEEVNF LSTYMDHEYS IKSVQISTLM RQLQQVKDSQ QDELDDLGEM
260 270 280 290 300
RRKVLESLSD KIQKKKKKIL SSVVAETQRP YEEALLQKMW ESQDFLKCMQ
310 320 330 340 350
RFREIIDQFE ENMPVLRAEV EELQAQTREP REVIFEDVLL RRPKCTPDMD
360
VILNIPVEEP LPF
Length:363
Mass (Da):42,859
Last modified:June 1, 2001 - v2
Checksum:i0B1A597E972A7EAD
GO

Sequence cautioni

The sequence BAC03772 differs from that shown. Reason: Frameshift at position 304.Curated

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_056847305I → F3 PublicationsCorresponds to variant dbSNP:rs3827147Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097394 mRNA Translation: BAC05033.1
AK091924 mRNA Translation: BAC03772.1 Frameshift.
AL034548 Genomic DNA No translation available.
CH471133 Genomic DNA Translation: EAX10681.1
BC134417 mRNA Translation: AAI34418.1
BC137450 mRNA Translation: AAI37451.1
CCDSiCCDS12994.1
RefSeqiNP_542138.1, NM_080571.1
NP_695001.2, NM_153269.2
UniGeneiHs.348112

Genome annotation databases

EnsembliENST00000360321; ENSP00000353470; ENSG00000196476
GeneIDi140680
KEGGihsa:140680
UCSCiuc002wde.3 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiCT096_HUMAN
AccessioniPrimary (citable) accession number: Q9NUD7
Secondary accession number(s): A3KPE0
, B2RPH9, Q8N840, Q8NAX5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2002
Last sequence update: June 1, 2001
Last modified: June 20, 2018
This is version 106 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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