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Protein

Uncharacterized protein C20orf96

Gene

C20orf96

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciZFISH:G66-30666-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C20orf96
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 20

Organism-specific databases

HGNCiHGNC:16227. C20orf96.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000196476.
PharmGKBiPA25803.

Polymorphism and mutation databases

BioMutaiC20orf96.
DMDMi26392576.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000794501 – 363Uncharacterized protein C20orf96Add BLAST363

Proteomic databases

EPDiQ9NUD7.
PaxDbiQ9NUD7.
PRIDEiQ9NUD7.

PTM databases

iPTMnetiQ9NUD7.
PhosphoSitePlusiQ9NUD7.

Expressioni

Gene expression databases

BgeeiENSG00000196476.
CleanExiHS_C20orf96.
ExpressionAtlasiQ9NUD7. baseline and differential.
GenevisibleiQ9NUD7. HS.

Organism-specific databases

HPAiHPA048649.

Interactioni

Protein-protein interaction databases

BioGridi126645. 4 interactors.

Structurei

3D structure databases

ProteinModelPortaliQ9NUD7.
SMRiQ9NUD7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili109 – 329Sequence analysisAdd BLAST221

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi264 – 268Poly-Lys5

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IIXG. Eukaryota.
ENOG4111YXE. LUCA.
GeneTreeiENSGT00390000003339.
HOGENOMiHOG000112025.
HOVERGENiHBG051181.
InParanoidiQ9NUD7.
OMAiVPWQQSK.
OrthoDBiEOG091G0LU4.
PhylomeDBiQ9NUD7.
TreeFamiTF330721.

Family and domain databases

InterProiIPR029236. DUF4618.
[Graphical view]
PfamiPF15397. DUF4618. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9NUD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHVLQKPKH SGTHSIVQEF QVPDYVPWQQ SKQETKPSTL PPVQQANSLH
60 70 80 90 100
TSKMKTLTRV QPVFHFKPTT VVTSCQPKNP RELHRRRKLD PGKMHAKIWL
110 120 130 140 150
MKTSLRSGRA ALRELRSREN FLSKLNRELI ETIQEMENST TLHVRALLQQ
160 170 180 190 200
QDTLATIIDI LEYSNKKRLQ QLKSELQEWE EKKKCKMSYL EQQAEQLNAK
210 220 230 240 250
IEKTQEEVNF LSTYMDHEYS IKSVQISTLM RQLQQVKDSQ QDELDDLGEM
260 270 280 290 300
RRKVLESLSD KIQKKKKKIL SSVVAETQRP YEEALLQKMW ESQDFLKCMQ
310 320 330 340 350
RFREIIDQFE ENMPVLRAEV EELQAQTREP REVIFEDVLL RRPKCTPDMD
360
VILNIPVEEP LPF
Length:363
Mass (Da):42,859
Last modified:June 1, 2001 - v2
Checksum:i0B1A597E972A7EAD
GO

Sequence cautioni

The sequence BAC03772 differs from that shown. Reason: Frameshift at position 304.Curated

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_056847305I → F.3 PublicationsCorresponds to variant rs3827147dbSNPEnsembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097394 mRNA. Translation: BAC05033.1.
AK091924 mRNA. Translation: BAC03772.1. Frameshift.
AL034548 Genomic DNA. Translation: CAB81629.2.
CH471133 Genomic DNA. Translation: EAX10681.1.
BC134417 mRNA. Translation: AAI34418.1.
BC137450 mRNA. Translation: AAI37451.1.
CCDSiCCDS12994.1.
RefSeqiNP_542138.1. NM_080571.1.
NP_695001.2. NM_153269.2.
UniGeneiHs.348112.

Genome annotation databases

EnsembliENST00000360321; ENSP00000353470; ENSG00000196476.
GeneIDi140680.
KEGGihsa:140680.
UCSCiuc002wde.3. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK097394 mRNA. Translation: BAC05033.1.
AK091924 mRNA. Translation: BAC03772.1. Frameshift.
AL034548 Genomic DNA. Translation: CAB81629.2.
CH471133 Genomic DNA. Translation: EAX10681.1.
BC134417 mRNA. Translation: AAI34418.1.
BC137450 mRNA. Translation: AAI37451.1.
CCDSiCCDS12994.1.
RefSeqiNP_542138.1. NM_080571.1.
NP_695001.2. NM_153269.2.
UniGeneiHs.348112.

3D structure databases

ProteinModelPortaliQ9NUD7.
SMRiQ9NUD7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi126645. 4 interactors.

PTM databases

iPTMnetiQ9NUD7.
PhosphoSitePlusiQ9NUD7.

Polymorphism and mutation databases

BioMutaiC20orf96.
DMDMi26392576.

Proteomic databases

EPDiQ9NUD7.
PaxDbiQ9NUD7.
PRIDEiQ9NUD7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000360321; ENSP00000353470; ENSG00000196476.
GeneIDi140680.
KEGGihsa:140680.
UCSCiuc002wde.3. human.

Organism-specific databases

CTDi140680.
GeneCardsiC20orf96.
HGNCiHGNC:16227. C20orf96.
HPAiHPA048649.
neXtProtiNX_Q9NUD7.
OpenTargetsiENSG00000196476.
PharmGKBiPA25803.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IIXG. Eukaryota.
ENOG4111YXE. LUCA.
GeneTreeiENSGT00390000003339.
HOGENOMiHOG000112025.
HOVERGENiHBG051181.
InParanoidiQ9NUD7.
OMAiVPWQQSK.
OrthoDBiEOG091G0LU4.
PhylomeDBiQ9NUD7.
TreeFamiTF330721.

Enzyme and pathway databases

BioCyciZFISH:G66-30666-MONOMER.

Miscellaneous databases

ChiTaRSiC20orf96. human.
GenomeRNAii140680.
PROiQ9NUD7.

Gene expression databases

BgeeiENSG00000196476.
CleanExiHS_C20orf96.
ExpressionAtlasiQ9NUD7. baseline and differential.
GenevisibleiQ9NUD7. HS.

Family and domain databases

InterProiIPR029236. DUF4618.
[Graphical view]
PfamiPF15397. DUF4618. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCT096_HUMAN
AccessioniPrimary (citable) accession number: Q9NUD7
Secondary accession number(s): A3KPE0
, B2RPH9, Q8N840, Q8NAX5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2002
Last sequence update: June 1, 2001
Last modified: November 2, 2016
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 20
    Human chromosome 20: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.