SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9NUA8

- ZBT40_HUMAN

UniProt

Q9NUA8 - ZBT40_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Zinc finger and BTB domain-containing protein 40

Gene
ZBTB40, KIAA0478
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri807 – 83024C2H2-type 1Add
BLAST
Zinc fingeri836 – 85823C2H2-type 2Add
BLAST
Zinc fingeri864 – 88724C2H2-type 3Add
BLAST
Zinc fingeri893 – 91523C2H2-type 4Add
BLAST
Zinc fingeri921 – 94424C2H2-type 5Add
BLAST
Zinc fingeri950 – 97324C2H2-type 6Add
BLAST
Zinc fingeri978 – 100023C2H2-type 7Add
BLAST
Zinc fingeri1006 – 102924C2H2-type 8Add
BLAST
Zinc fingeri1046 – 106924C2H2-type 9Add
BLAST
Zinc fingeri1075 – 109824C2H2-type 10Add
BLAST
Zinc fingeri1104 – 112724C2H2-type 11; atypicalAdd
BLAST
Zinc fingeri1135 – 115824C2H2-type 12Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. bone mineralization Source: UniProtKB
  2. cellular response to DNA damage stimulus Source: UniProtKB
  3. regulation of transcription, DNA-templated Source: UniProtKB-KW
  4. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger and BTB domain-containing protein 40
Gene namesi
Name:ZBTB40
Synonyms:KIAA0478
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 1

Organism-specific databases

HGNCiHGNC:29045. ZBTB40.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. nucleus Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142670544.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12391239Zinc finger and BTB domain-containing protein 40PRO_0000047745Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei703 – 7031Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9NUA8.
PaxDbiQ9NUA8.
PRIDEiQ9NUA8.

PTM databases

PhosphoSiteiQ9NUA8.

Expressioni

Gene expression databases

ArrayExpressiQ9NUA8.
BgeeiQ9NUA8.
CleanExiHS_ZBTB40.
GenevestigatoriQ9NUA8.

Organism-specific databases

HPAiHPA042386.

Interactioni

Protein-protein interaction databases

BioGridi115251. 3 interactions.
IntActiQ9NUA8. 3 interactions.
MINTiMINT-7969810.
STRINGi9606.ENSP00000364798.

Structurei

3D structure databases

ProteinModelPortaliQ9NUA8.
SMRiQ9NUA8. Positions 1-112, 732-1159.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 8764BTBAdd
BLAST

Sequence similaritiesi

Contains 1 BTB (POZ) domain.
Contains 12 C2H2-type zinc fingers.

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000143421.
HOVERGENiHBG058697.
InParanoidiQ9NUA8.
KOiK10512.
OMAiCVTQLRP.
OrthoDBiEOG7BGHJW.
PhylomeDBiQ9NUA8.
TreeFamiTF350897.

Family and domain databases

Gene3Di3.30.160.60. 7 hits.
3.30.710.10. 1 hit.
InterProiIPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamiPF00651. BTB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00225. BTB. 1 hit.
SM00355. ZnF_C2H2. 14 hits.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
PROSITEiPS50097. BTB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 12 hits.
PS50157. ZINC_FINGER_C2H2_2. 11 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9NUA8-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MELPNYSRQL LQQLYTLCKE QQFCDCTISI GTIYFRAHKL VLAAASLLFK     50
TLLDNTDTIS IDASVVSPEE FALLLEMMYT GKLPVGKHNF SKIISLADSL 100
QMFDVAVSCK NLLTSLVNCS VQGQVVRDVS APSSETFRKE PEKPQVEILS 150
SEGAGEPHSS PELAATPGGP VKAETEEAAH SVSQEMSVNS PTAQESQRNA 200
ETPAETPTTA EACSPSPAVQ TFSEAKKTST EPGCERKHYQ LNFLLENEGV 250
FSDALMVTQD VLKKLEMCSE IKGPQKEMIV KCFEGEGGHS AFQRILGKVR 300
EESLDVQTVV SLLRLYQYSN PAVKTALLDR KPEDVDTVQP KGSTEEGKTL 350
SVLLLEHKED LIQCVTQLRP IMESLETAKE EFLTGTEKRV ILNCCEGRTP 400
KETIENLLHR MTEEKTLTAE GLVKLLQAVK TTFPNLGLLL EKLQKSATLP 450
STTVQPSPDD YGTELLRRYH ENLSEIFTDN QILLKMISHM TSLAPGEREV 500
MEKLVKRDSG SGGFNSLISA VLEKQTLSAT AIWQLLLVVQ ETKTCPLDLL 550
MEEIRREPGA DAFFRAVTTP EHATLETILR HNQLILEAIQ QKIEYKLFTS 600
EEEHLAETVK EILSIPSETA SPEASLRAVL SRAMEKSVPA IEICHLLCSV 650
HKSFPGLQPV MQELAYIGVL TKEDGEKETW KVSNKFHLEA NNKEDEKAAK 700
EDSQPGEQND QGETGSLPGQ QEKEASASPD PAKKSFICKA CDKSFHFYCR 750
LKVHMKRCRV AKSKQVQCKE CSETKDSKKE LDKHQLEAHG AGGEPDAPKK 800
KKKRLPVTCD LCGREFAHAS GMQYHKLTEH FDEKPFSCEE CGAKFAANST 850
LKNHLRLHTG DRPFMCKHCL MTFTQASALA YHTKKKHSEG KMYACQYCDA 900
VFAQSIELSR HVRTHTGDKP YVCRDCGKGF RQANGLSIHL HTFHNIEDPY 950
DCKKCRMSFP TLQDHRKHIH EVHSKEYHPC PTCGKIFSAP SMLERHVVTH 1000
VGGKPFSCGI CNKAYQQLSG LWYHNRTHHP DVFAAQNHRS SKFSSLQCSS 1050
CDKTFPNTIE HKKHIKAEHA DMKFHECDQC KELFPTPALL QVHVKCQHSG 1100
SQPFRCLYCA ATFRFPGALQ HHVTTEHFKQ SETTFPCELC GELFTSQAQL 1150
DSHLESEHPK VMSTETQAAA SQMAQVIQTP EPVAPTEQVI TLEETQLAGS 1200
QVFVTLPDSQ ASQASSELVA VTVEDLLDGT VTLICGEAK 1239
Length:1,239
Mass (Da):138,118
Last modified:July 5, 2005 - v4
Checksum:i1B35528EB104052C
GO
Isoform 2 (identifier: Q9NUA8-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     116-162: Missing.
     270-281: EIKGPQKEMIVK → NCCVPVEAVPIF
     282-1239: Missing.

Note: No experimental confirmation available.

Show »
Length:234
Mass (Da):25,555
Checksum:iB6ADF1CB81075860
GO

Sequence cautioni

The sequence BAA32323.2 differs from that shown. Reason: Erroneous initiation.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti225 – 2251A → T.
Corresponds to variant rs6659222 [ dbSNP | Ensembl ].
VAR_052920
Natural varianti267 – 2671M → I.
Corresponds to variant rs36115661 [ dbSNP | Ensembl ].
VAR_052921
Natural varianti595 – 5951Y → C.1 Publication
Corresponds to variant rs209729 [ dbSNP | Ensembl ].
VAR_052922
Natural varianti997 – 9971V → M.1 Publication
Corresponds to variant rs209720 [ dbSNP | Ensembl ].
VAR_052923

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei116 – 16247Missing in isoform 2. VSP_007757Add
BLAST
Alternative sequencei270 – 28112EIKGP…EMIVK → NCCVPVEAVPIF in isoform 2. VSP_007758Add
BLAST
Alternative sequencei282 – 1239958Missing in isoform 2. VSP_007759Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti218 – 2181A → P in BAA32323. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB007947 mRNA. Translation: BAA32323.2. Different initiation.
AK095273 mRNA. Translation: BAC04518.1.
AL035703 Genomic DNA. Translation: CAI22040.1.
CCDSiCCDS224.1. [Q9NUA8-1]
RefSeqiNP_001077090.1. NM_001083621.1. [Q9NUA8-1]
NP_055685.3. NM_014870.3. [Q9NUA8-1]
UniGeneiHs.418966.

Genome annotation databases

EnsembliENST00000375647; ENSP00000364798; ENSG00000184677. [Q9NUA8-1]
ENST00000404138; ENSP00000384527; ENSG00000184677. [Q9NUA8-1]
GeneIDi9923.
KEGGihsa:9923.
UCSCiuc001bft.2. human. [Q9NUA8-1]

Polymorphism databases

DMDMi68847213.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB007947 mRNA. Translation: BAA32323.2 . Different initiation.
AK095273 mRNA. Translation: BAC04518.1 .
AL035703 Genomic DNA. Translation: CAI22040.1 .
CCDSi CCDS224.1. [Q9NUA8-1 ]
RefSeqi NP_001077090.1. NM_001083621.1. [Q9NUA8-1 ]
NP_055685.3. NM_014870.3. [Q9NUA8-1 ]
UniGenei Hs.418966.

3D structure databases

ProteinModelPortali Q9NUA8.
SMRi Q9NUA8. Positions 1-112, 732-1159.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 115251. 3 interactions.
IntActi Q9NUA8. 3 interactions.
MINTi MINT-7969810.
STRINGi 9606.ENSP00000364798.

PTM databases

PhosphoSitei Q9NUA8.

Polymorphism databases

DMDMi 68847213.

Proteomic databases

MaxQBi Q9NUA8.
PaxDbi Q9NUA8.
PRIDEi Q9NUA8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000375647 ; ENSP00000364798 ; ENSG00000184677 . [Q9NUA8-1 ]
ENST00000404138 ; ENSP00000384527 ; ENSG00000184677 . [Q9NUA8-1 ]
GeneIDi 9923.
KEGGi hsa:9923.
UCSCi uc001bft.2. human. [Q9NUA8-1 ]

Organism-specific databases

CTDi 9923.
GeneCardsi GC01P022778.
H-InvDB HIX0000232.
HGNCi HGNC:29045. ZBTB40.
HPAi HPA042386.
MIMi 612106. gene.
neXtProti NX_Q9NUA8.
PharmGKBi PA142670544.
HUGEi Search...
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000143421.
HOVERGENi HBG058697.
InParanoidi Q9NUA8.
KOi K10512.
OMAi CVTQLRP.
OrthoDBi EOG7BGHJW.
PhylomeDBi Q9NUA8.
TreeFami TF350897.

Miscellaneous databases

ChiTaRSi ZBTB40. human.
GeneWikii ZBTB40.
GenomeRNAii 9923.
NextBioi 37436.
PROi Q9NUA8.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q9NUA8.
Bgeei Q9NUA8.
CleanExi HS_ZBTB40.
Genevestigatori Q9NUA8.

Family and domain databases

Gene3Di 3.30.160.60. 7 hits.
3.30.710.10. 1 hit.
InterProi IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR013069. BTB_POZ.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
Pfami PF00651. BTB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view ]
SMARTi SM00225. BTB. 1 hit.
SM00355. ZnF_C2H2. 14 hits.
[Graphical view ]
SUPFAMi SSF54695. SSF54695. 1 hit.
PROSITEi PS50097. BTB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 12 hits.
PS50157. ZINC_FINGER_C2H2_2. 11 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Characterization of cDNA clones in size-fractionated cDNA libraries from human brain."
    Seki N., Ohira M., Nagase T., Ishikawa K., Miyajima N., Nakajima D., Nomura N., Ohara O.
    DNA Res. 4:345-349(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), VARIANTS CYS-595 AND MET-997.
    Tissue: Brain.
  2. "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones."
    Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T.
    DNA Res. 9:99-106(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION.
  3. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Tongue.
  4. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-703, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Embryonic kidney.
  6. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.

Entry informationi

Entry nameiZBT40_HUMAN
AccessioniPrimary (citable) accession number: Q9NUA8
Secondary accession number(s): O75066, Q5TFU5, Q8N1R1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: July 5, 2005
Last modified: July 9, 2014
This is version 127 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi