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Protein

Putative ribosomal RNA-processing protein 7 homolog B

Gene

RRP7BP

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ribosomal RNA-processing protein 7 homolog B
Alternative name(s):
Putative gastric cancer antigen Zg14-like protein
Gene namesi
Name:RRP7BPImported
Synonyms:RRP7B
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:30454. RRP7BP.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Polymorphism and mutation databases

DMDMi74719211.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 103103Putative ribosomal RNA-processing protein 7 homolog BPRO_0000336994Add
BLAST

Proteomic databases

EPDiQ9NSQ0.
PaxDbiQ9NSQ0.
PRIDEiQ9NSQ0.

PTM databases

iPTMnetiQ9NSQ0.
PhosphoSiteiQ9NSQ0.

Expressioni

Organism-specific databases

HPAiHPA046768.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000321449.

Structurei

3D structure databases

ProteinModelPortaliQ9NSQ0.
SMRiQ9NSQ0. Positions 60-103.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili71 – 10030Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the RRP7 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG4008. Eukaryota.
ENOG410YHJN. LUCA.
HOVERGENiHBG101624.
InParanoidiQ9NSQ0.

Family and domain databases

InterProiIPR024326. RRP7.
[Graphical view]
PANTHERiPTHR13191. PTHR13191. 1 hit.
PfamiPF12923. RRP7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9NSQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAYDQKIAE EEAKAKEEEG VPDEEGWVKV TRRGRRPVLP RTEAASLRVL
60 70 80 90 100
ERERRKRSQK ELLNYAWQHR ESKMEHLAQL RKKFEEDKQR IELLRAQRKF

RPY
Length:103
Mass (Da):12,575
Last modified:October 1, 2000 - v1
Checksum:i7798DF18695F0F15
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti48 – 481R → W in BAG51960 (PubMed:16303743).Curated
Sequence conflicti59 – 591Q → R in BAG51960 (PubMed:16303743).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL157851 mRNA. Translation: CAB75937.1.
AK074492 mRNA. Translation: BAG51960.1.
UniGeneiHs.534041.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL157851 mRNA. Translation: CAB75937.1.
AK074492 mRNA. Translation: BAG51960.1.
UniGeneiHs.534041.

3D structure databases

ProteinModelPortaliQ9NSQ0.
SMRiQ9NSQ0. Positions 60-103.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000321449.

PTM databases

iPTMnetiQ9NSQ0.
PhosphoSiteiQ9NSQ0.

Polymorphism and mutation databases

DMDMi74719211.

Proteomic databases

EPDiQ9NSQ0.
PaxDbiQ9NSQ0.
PRIDEiQ9NSQ0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiRRP7BP.
HGNCiHGNC:30454. RRP7BP.
HPAiHPA046768.
neXtProtiNX_Q9NSQ0.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4008. Eukaryota.
ENOG410YHJN. LUCA.
HOVERGENiHBG101624.
InParanoidiQ9NSQ0.

Miscellaneous databases

ChiTaRSiRRP7B. human.

Family and domain databases

InterProiIPR024326. RRP7.
[Graphical view]
PANTHERiPTHR13191. PTHR13191. 1 hit.
PfamiPF12923. RRP7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Reevaluating human gene annotation: a second-generation analysis of chromosome 22."
    Collins J.E., Goward M.E., Cole C.G., Smink L.J., Huckle E.J., Knowles S., Bye J.M., Beare D.M., Dunham I.
    Genome Res. 13:27-36(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries."
    Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y.
    , Aotsuka S., Sasaki N., Hattori A., Okumura K., Nagai K., Sugano S., Isogai T.
    DNA Res. 12:117-126(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Embryo.

Entry informationi

Entry nameiRRP7B_HUMAN
AccessioniPrimary (citable) accession number: Q9NSQ0
Secondary accession number(s): B3KQ98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: October 1, 2000
Last modified: June 8, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 22
    Human chromosome 22: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.