##gff-version 3
Q9NRR5	UniProtKB	Chain	1	601	.	.	.	ID=PRO_0000211015;Note=Ubiquilin-4	
Q9NRR5	UniProtKB	Domain	13	87	.	.	.	Note=Ubiquitin-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00214	
Q9NRR5	UniProtKB	Domain	192	229	.	.	.	Note=STI1 1;Ontology_term=ECO:0000255;evidence=ECO:0000255	
Q9NRR5	UniProtKB	Domain	230	261	.	.	.	Note=STI1 2;Ontology_term=ECO:0000255;evidence=ECO:0000255	
Q9NRR5	UniProtKB	Domain	393	440	.	.	.	Note=STI1 3;Ontology_term=ECO:0000255;evidence=ECO:0000255	
Q9NRR5	UniProtKB	Domain	444	476	.	.	.	Note=STI1 4;Ontology_term=ECO:0000255;evidence=ECO:0000255	
Q9NRR5	UniProtKB	Domain	553	598	.	.	.	Note=UBA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00212	
Q9NRR5	UniProtKB	Region	87	155	.	.	.	Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Region	301	366	.	.	.	Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Region	490	533	.	.	.	Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Compositional bias	90	104	.	.	.	Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Compositional bias	116	140	.	.	.	Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Compositional bias	301	325	.	.	.	Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Compositional bias	340	366	.	.	.	Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Compositional bias	495	533	.	.	.	Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite	
Q9NRR5	UniProtKB	Modified residue	98	98	.	.	.	Note=Phosphoserine;Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:20068231;Dbxref=PMID:20068231	
Q9NRR5	UniProtKB	Modified residue	144	144	.	.	.	Note=Phosphoserine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30612738;Dbxref=PMID:30612738	
Q9NRR5	UniProtKB	Modified residue	287	287	.	.	.	Note=Phosphothreonine;Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:23186163;Dbxref=PMID:23186163	
Q9NRR5	UniProtKB	Modified residue	318	318	.	.	.	Note=Phosphoserine%3B by ATM;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30612738,ECO:0000269|PubMed:34245648;Dbxref=PMID:30612738,PMID:34245648	
Q9NRR5	UniProtKB	Cross-link	23	23	.	.	.	Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:28112733;Dbxref=PMID:28112733	
Q9NRR5	UniProtKB	Cross-link	62	62	.	.	.	Note=Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2);Ontology_term=ECO:0007744;evidence=ECO:0007744|PubMed:28112733;Dbxref=PMID:28112733	
Q9NRR5	UniProtKB	Alternative sequence	93	226	.	.	.	ID=VSP_041187;Note=In isoform 2. AATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQ->PPAAPSLPAADAEPRVTLHPYQSPSHAGIAADPAGTTDLADRGPWAGTQPWLLWDIPDPSTLSRQQRRVYARGPHFLTSHASHIFSNRGFQRPAATHAADDPAFGWKWKLTGADARSEISAAAGAAQLHGLHQS;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039	
Q9NRR5	UniProtKB	Alternative sequence	227	601	.	.	.	ID=VSP_041188;Note=In isoform 2. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039	
Q9NRR5	UniProtKB	Natural variant	90	90	.	.	.	ID=VAR_081427;Note=In ALS%3B impaired proteasome efficiency leading to accumulation of CTNNB1. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28463112;Dbxref=dbSNP:rs1465567777,PMID:28463112	
Q9NRR5	UniProtKB	Natural variant	326	601	.	.	.	ID=VAR_081428;Note=Found in patients with UBQLN4 deficiency syndrome (UBDS)%3B likely pathogenic. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:30612738;Dbxref=PMID:30612738	
Q9NRR5	UniProtKB	Natural variant	495	495	.	.	.	ID=VAR_052685;Note=I->M;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10575211,ECO:0000269|PubMed:14702039;Dbxref=dbSNP:rs2297792,PMID:10575211,PMID:14702039	
Q9NRR5	UniProtKB	Mutagenesis	55	55	.	.	.	Note=Loss of interaction with UBQLN1. I->A	
Q9NRR5	UniProtKB	Mutagenesis	318	318	.	.	.	Note=Abolishes phosphorylation by ATM in response to DNA damage and impaired ability to regulate DNA repair. S->A;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:30612738,ECO:0000269|PubMed:34245648;Dbxref=PMID:30612738,PMID:34245648	
Q9NRR5	UniProtKB	Sequence conflict	188	189	.	.	.	Note=QL->HV;Ontology_term=ECO:0000305;evidence=ECO:0000305	
Q9NRR5	UniProtKB	Sequence conflict	298	298	.	.	.	Note=R->Q;Ontology_term=ECO:0000305;evidence=ECO:0000305