Reviewed,
UniProtKB/Swiss-Prot Q9NRI5 (DISC1_HUMAN)
Last modified
February 9, 2010.
Version 77.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Disrupted in schizophrenia 1 protein | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 854 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subunit structure | Interacts with tubulin alpha, ACTN2, ANKHD1, ATF4, ATF5, CEP63, EIF3S3, MAP1A, NDEL1, PAFAH1B1, RANBP9, SPTBN4, SYNE1 and TRAF3IP1. Interaction with microtubules may be mediated in part by TRAF3IP1. Ref.6 Ref.8 Ref.11 |
| Subcellular location | Cytoplasm. Cytoplasm › cytoskeleton › centrosome. Cytoplasm › cytoskeleton. Note: Localizes to neurites By similarity. Localizes to punctate cytoplasmic foci which overlap in part with mitochondria. Also localizes to the centrosome. Ref.6 Ref.8 Ref.11 Ref.12 |
| Tissue specificity | Ubiquitous. Highly expressed in the dentate gyrus of the hippocampus. Also expressed in the temporal and parahippocampal cortices and cells of the white matter. Ref.14 |
| Developmental stage | Expression rises within the dentate gyrus and temporal cortex from the neonatal period to infancy, declines markedly in adolescence, and declines further with aging. Ref.14 |
| Involvement in disease | A chromosomal aberration involving DISC1 segregates with schizophrenia and related psychiatric disorders in a large Scottish family. Translocation t(1;11)(q42.1;q14.3). The truncated DISC1 protein produced by this translocation is unable to interact with ATF4, ATF5 and NDEL1. Genetic variation in DISC1 may be associated with susceptibility to schizophrenia 9 (SCZD9) [MIM:604906]. Schizophrenia [MIM:181500] is a psychosis, a disorder of thought and sense of self. Although it affects emotions, it is distinguished from mood disorders in which such disturbances are primary. Similarly, there may be mild impairment of cognitive function, and it is distinguished from the dementias in which disturbed cognitive function is considered primary. No objective biological test for schizophrenia exists. Schizophrenia is a common disorder with a lifetime prevalence of approximately 1%. It is highly heritable but the genetics are complex. Ref.5 Ref.7 Ref.10 Ref.13 Genetic variation in DISC1 may be associated with susceptibility to schizoaffective disorder [MIM:181500]. Schizoaffective disorder is a psychiatric condition characterized by the co-occurrence of symptoms of both mood disorder and psychosis. |
| Sequence caution | The sequence CAH70955.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI15677.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI17204.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI21886.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI22543.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence CAI23013.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm Cytoskeleton Microtubule |
| Coding sequence diversity | Alternative splicing Chromosomal rearrangement Polymorphism |
| Domain | Coiled coil |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | microtubule Inferred from electronic annotation. Source: UniProtKB-KW microtubule organizing centerInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | protein binding Ref.1 Ref.6 Inferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9NRI5-1) Also known as: L; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9NRI5-2) Also known as: LV; The sequence of this isoform differs from the canonical sequence as follows: 748-769: Missing. | ||||||
| Isoform 3 (identifier: Q9NRI5-3) Also known as: S; The sequence of this isoform differs from the canonical sequence as follows: 661-678: ETSVKENTMKYMETLKNK → GYKYCDAESWTQRSQQLA 679-854: Missing. | ||||||
| Isoform 4 (identifier: Q9NRI5-4) Also known as: ES; The sequence of this isoform differs from the canonical sequence as follows: 350-369: VISLRLKLQKLQEDAVENDD → LEPIALDPPWKPRHPEPNSY 370-854: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 854 | 854 | Disrupted in schizophrenia 1 protein | PRO_0000079916 | |||||
Regions | |||||||||
| Region | 1 – 292 | 292 | Interaction with MAP1A | ||||||
| Region | 293 – 696 | 404 | Interaction with TRAF3IP1 | ||||||
| Region | 440 – 597 | 158 | Required for localization to punctate cytoplasmic foci | ||||||
| Region | 598 – 854 | 257 | Interaction with ATF4 and ATF5 | ||||||
| Region | 727 – 854 | 128 | Interaction with NDEL1 and PAFAH1B1 | ||||||
| Coiled coil | 366 – 394 | 29 | Potential | ||||||
| Coiled coil | 452 – 505 | 54 | Potential | ||||||
| Coiled coil | 602 – 666 | 65 | Potential | ||||||
| Coiled coil | 802 – 830 | 29 | Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 350 – 369 | 20 | VISLR…VENDD → LEPIALDPPWKPRHPEPNSY in isoform 4. | VSP_019314 | |||||
| Alternative sequence | 370 – 854 | 485 | Missing in isoform 4. | VSP_019315 | |||||
| Alternative sequence | 661 – 678 | 18 | ETSVK…TLKNK → GYKYCDAESWTQRSQQLA in isoform 3. | VSP_019316 | |||||
| Alternative sequence | 679 – 854 | 176 | Missing in isoform 3. | VSP_019317 | |||||
| Alternative sequence | 748 – 769 | 22 | Missing in isoform 2. | VSP_003849 | |||||
| Natural variant | 5 | 1 | G → V: dbSNP rs3738400. Ref.10 | VAR_030422 | |||||
| Natural variant | 116 | 1 | A → V: dbSNP rs56020408. | VAR_061642 | |||||
| Natural variant | 264 | 1 | R → Q: dbSNP rs3738401. Ref.1 Ref.2 Ref.3 | VAR_022437 | |||||
| Natural variant | 328 | 1 | T → N: dbSNP rs55795950. | VAR_061643 | |||||
| Natural variant | 330 | 1 | L → F: dbSNP rs34622148. | VAR_050954 | |||||
| Natural variant | 531 | 1 | G → R: dbSNP rs56229136. | VAR_061644 | |||||
| Natural variant | 607 | 1 | L → F Associated with susceptibility to schizoaffective disorder. dbSNP rs6675281. Ref.10 | VAR_026704 | |||||
| Natural variant | 704 | 1 | S → C: dbSNP rs821616. Ref.13 Ref.1 | VAR_022438 | |||||
Experimental info | |||||||||
| Mutagenesis | 815 | 1 | L → P: Impairs interaction with NDEL1; when associated with P-822. Ref.11 | ||||||
| Mutagenesis | 822 | 1 | L → P: Impairs interaction with NDEL1; when associated with P-815. Ref.11 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Disruption of two novel genes by a schizophrenia-linked translocation." Millar J.K., Wilson-Annan J.C., Anderson S., Christie S., Taylor M.S., Semple C.A.M., Devon R.S., St Clair D.M., Muir W.J., Blackwood D.H.R., Porteous D.J. Hum. Mol. Genet. 9:1415-1423(2000) [PubMed: 10814723] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 1), VARIANTS GLN-264 AND CYS-704. |
| [2] | "Evolutionary constraints on the Disrupted in Schizophrenia locus." Taylor M.S., Devon R.S., Millar J.K., Porteous D.J. Genomics 81:67-77(2003) [PubMed: 12573262] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 3 AND 4), VARIANT GLN-264. Tissue: Fetal heart. |
| [3] | "Characterization of cDNA clones in size-fractionated cDNA libraries from human brain." Seki N., Ohira M., Nagase T., Ishikawa K., Miyajima N., Nakajima D., Nomura N., Ohara O. DNA Res. 4:345-349(1997) [PubMed: 9455484] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT GLN-264. Tissue: Brain. |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Chromosome 1 loci in Finnish schizophrenia families." Ekelund J., Hovatta I., Parker A., Paunio T., Varilo T., Martin R., Suhonen J., Ellonen P., Chan G., Sinsheimer J.S., Sobel E., Juvonen H., Arajaervi R., Partonen T., Suvisaari J., Loennqvist J., Meyer J., Peltonen L. Hum. Mol. Genet. 10:1611-1617(2001) [PubMed: 11468279] [Abstract] Cited for: INVOLVEMENT IN SUSCEPTIBILITY TO SCZD9. |
| [6] | "DISC1 (Disrupted-In-Schizophrenia 1) is a centrosome-associated protein that interacts with MAP1A, MIPT3, ATF4/5 and NUDEL: regulation and loss of interaction with mutation." Morris J.A., Kandpal G., Ma L., Austin C.P. Hum. Mol. Genet. 12:1591-1608(2003) [PubMed: 12812986] [Abstract] Cited for: INTERACTION WITH ACTN2; ANKHD1; ATF4; ATF5; CEP63; EIF3S3; MAP1A; MICROTUBULES; NDEL1; RANBP9; SPTBN4; SYNE1 AND TRAF3IP1, SUBCELLULAR LOCATION. |
| [7] | "Haplotype transmission analysis provides evidence of association for DISC1 to schizophrenia and suggests sex-dependent effects." Hennah W., Varilo T., Kestilae M., Paunio T., Arajaervi R., Haukka J., Parker A., Martin R., Levitzky S., Partonen T., Meyer J., Loennqvist J., Peltonen L., Ekelund J. Hum. Mol. Genet. 12:3151-3159(2003) [PubMed: 14532331] [Abstract] Cited for: INVOLVEMENT IN SUSCEPTIBILITY TO SCZD9. |
| [8] | "Disrupted-in-Schizophrenia-1 (DISC-1): mutant truncation prevents binding to NudE-like (NUDEL) and inhibits neurite outgrowth." Ozeki Y., Tomoda T., Kleiderlein J., Kamiya A., Bord L., Fujii K., Okawa M., Yamada N., Hatten M.E., Snyder S.H., Ross C.A., Sawa A. Proc. Natl. Acad. Sci. U.S.A. 100:289-294(2003) [PubMed: 12506198] [Abstract] Cited for: INTERACTION WITH NDEL1, SUBCELLULAR LOCATION. |
| [9] | Erratum Ozeki Y., Tomoda T., Kleiderlein J., Kamiya A., Bord L., Fujii K., Okawa M., Yamada N., Hatten M.E., Snyder S.H., Ross C.A., Sawa A. Proc. Natl. Acad. Sci. U.S.A. 101:13969-13969(2004) |
| [10] | "Disrupted in schizophrenia 1 (DISC1): association with schizophrenia, schizoaffective disorder, and bipolar disorder." Hodgkinson C.A., Goldman D., Jaeger J., Persaud S., Kane J.M., Lipsky R.H., Malhotra A.K. Am. J. Hum. Genet. 75:862-872(2004) [PubMed: 15386212] [Abstract] Cited for: INVOLVEMENT IN SUSCEPTIBILITY TO SCZD9 AND SCHIZOAFFECTIVE DISORDER, VARIANTS VAL-5 AND PHE-607. |
| [11] | "Disrupted in Schizophrenia 1 and Nudel form a neurodevelopmentally regulated protein complex: implications for schizophrenia and other major neurological disorders." Brandon N.J., Handford E.J., Schurov I., Rain J.-C., Pelling M., Duran-Jimeniz B., Camargo L.M., Oliver K.R., Beher D., Shearman M.S., Whiting P.J. Mol. Cell. Neurosci. 25:42-55(2004) [PubMed: 14962739] [Abstract] Cited for: INTERACTION WITH TUBULIN ALPHA; NDEL1 AND PAFAH1B1, SUBCELLULAR LOCATION, MUTAGENESIS OF LEU-815 AND LEU-822. |
| [12] | "Subcellular targeting of DISC1 is dependent on a domain independent from the Nudel binding site." Brandon N.J., Schurov I., Camargo L.M., Handford E.J., Duran-Jimeniz B., Hunt P., Millar J.K., Porteous D.J., Shearman M.S., Whiting P.J. Mol. Cell. Neurosci. 28:613-624(2005) [PubMed: 15797709] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [13] | "Variation in DISC1 affects hippocampal structure and function and increases risk for schizophrenia." Callicott J.H., Straub R.E., Pezawas L., Egan M.F., Mattay V.S., Hariri A.R., Verchinski B.A., Meyer-Lindenberg A., Balkissoon R., Kolachana B., Goldberg T.E., Weinberger D.R. Proc. Natl. Acad. Sci. U.S.A. 102:8627-8632(2005) [PubMed: 15939883] [Abstract] Cited for: INVOLVEMENT IN SUSCEPTIBILITY TO SCZD9, VARIANT CYS-704. |
| [14] | "Expression of DISC1 binding partners is reduced in schizophrenia and associated with DISC1 SNPs." Lipska B.K., Peters T., Hyde T.M., Halim N., Horowitz C., Mitkus S., Weickert C.S., Matsumoto M., Sawa A., Straub R.E., Vakkalanka R., Herman M.M., Weinberger D.R., Kleinman J.E. Hum. Mol. Genet. 15:1245-1258(2006) [PubMed: 16510495] [Abstract] Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF222983 Genomic DNA. Translation: AAF73874.1. AF222987 Genomic DNA. Translation: AAF73877.1. AF222980 mRNA. Translation: AAF73889.1. AJ506178 mRNA. Translation: CAD44628.1. AJ506177 mRNA. Translation: CAD44631.1. AB007926 mRNA. Translation: BAA32302.1. Different initiation. AL626763 AL450284 Genomic DNA. Translation: CAH70955.1. Sequence problems.AL626763 AL450284 Genomic DNA. Translation: CAH70956.1. AL626763, AL359543 Genomic DNA. Translation: CAH70957.1. AL450284 AL626763 Genomic DNA. Translation: CAI15677.1. Sequence problems.AL450284 AL626763 Genomic DNA. Translation: CAI15679.1. AL359543 AL626763 Genomic DNA. Translation: CAI17204.1. Sequence problems.AL359543 AL626763 Genomic DNA. Translation: CAI17206.1. AL359543, AL626763 Genomic DNA. Translation: CAI17207.1. AL136171 AL626763 Genomic DNA. Translation: CAI21886.1. Sequence problems.AL136171 AL626763 Genomic DNA. Translation: CAI21888.1. AL161743 AL626763 Genomic DNA. Translation: CAI22543.1. Sequence problems.AL445200 AL626763 Genomic DNA. Translation: CAI23013.1. Sequence problems. |
| IPI | IPI00032896. IPI00217534. IPI00554636. IPI00935747. |
| PIR | T00071. |
| RefSeq | NP_001012975.1. NP_001012976.1. NP_001012977.1. NP_061132.2. |
| UniGene | Hs.13318 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9NRI5. 101 interactions. |
| STRING | Q9NRI5. |
Genome annotation databases | |
| Ensembl | ENST00000439617; ENSP00000403888; ENSG00000162946; Homo sapiens. [Genome view] |
| GeneID | 27185. |
| KEGG | hsa:27185. |
| UCSC | uc001hux.1. human. uc001huy.1. human. uc001huz.1. human. uc001hva.1. human. |
Organism-specific databases | |
| CTD | 27185. |
| GeneCards | GC01P229829. |
| H-InvDB | HIX0022179. |
| HGNC | HGNC:2888. DISC1. |
| HPA | CAB013016. |
| MIM | 181500. phenotype. 604906. phenotype. 605210. gene. |
| Orphanet | 3140. Schizophrenia. |
| PharmGKB | PA27342. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG14289. |
| HOVERGEN | Q9NRI5. |
Gene expression databases | |
| ArrayExpress | Q9NRI5. |
| Bgee | Q9NRI5. |
| Genevestigator | Q9NRI5. |
| GermOnline | ENSG00000162946. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR009053. Prefoldin. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 50024. |
| SOURCE | Search... |
Entry information
| Entry name | DISC1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9NRI5 Secondary accession number(s): O75045 Q9NRI4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with


