ID PRDC1_HUMAN Reviewed; 225 AA. AC Q9NRG1; B7Z1Z3; Q53HA7; Q59EL9; Q5VV18; Q5VV20; DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2000, sequence version 1. DT 27-MAR-2024, entry version 193. DE RecName: Full=Phosphoribosyltransferase domain-containing protein 1; GN Name=PRTFDC1; Synonyms=HHGP; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Liver cancer; RA Li Y., Wu T., Xu S., Ren S., Chen Z., Han Z.; RT "A novel gene expressed in human liver cancer tissue."; RL Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). RC TISSUE=Brain cortex, and Embryo; RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., RA Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Brain; RA Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S., RA Ohara O., Nagase T., Kikuno R.F.; RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases. RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING RP (ISOFORMS 2 AND 3). RX PubMed=15164054; DOI=10.1038/nature02462; RA Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., RA Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., RA Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., RA Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P., RA Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., RA Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., RA Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., RA Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., RA Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., RA Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., RA Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., RA Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., RA Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., RA Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., RA Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., RA McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., RA Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., RA Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., RA Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., RA Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., RA Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., RA Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., RA Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., RA Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.; RT "The DNA sequence and comparative analysis of human chromosome 10."; RL Nature 429:375-381(2004). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., RA Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., RA Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., RA Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., RA Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., RA Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., RA Hunkapiller M.W., Myers E.W., Venter J.C.; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC TISSUE=Eye; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [7] RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR RP METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY RP [LARGE SCALE ANALYSIS]. RX PubMed=19413330; DOI=10.1021/ac9004309; RA Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.; RT "Lys-N and trypsin cover complementary parts of the phosphoproteome in a RT refined SCX-based approach."; RL Anal. Chem. 81:4493-4501(2009). RN [8] RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR RP METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY RP [LARGE SCALE ANALYSIS]. RX PubMed=22814378; DOI=10.1073/pnas.1210303109; RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A., RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E., Timmerman E., RA Prieto J., Arnesen T., Sherman F., Gevaert K., Aldabe R.; RT "N-terminal acetylome analyses and functional insights of the N-terminal RT acetyltransferase NatB."; RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012). RN [9] RP X-RAY CRYSTALLOGRAPHY (1.7 ANGSTROMS) IN COMPLEX WITH GMP; PHOSPHATE AND RP CALCIUM IONS, SUBUNIT, AND ABSENCE OF PHOSPHORIBOSYLTRANSFERASE ACTIVITY. RX PubMed=21054786; DOI=10.1111/j.1742-4658.2010.07897.x; RA Welin M., Egeblad L., Johansson A., Stenmark P., Wang L., Flodin S., RA Nyman T., Tresaugues L., Kotenyova T., Johansson I., Eriksson S., RA Eklund H., Nordlund P.; RT "Structural and functional studies of the human phosphoribosyltransferase RT domain containing protein 1."; RL FEBS J. 277:4920-4930(2010). CC -!- FUNCTION: Has low, barely detectable phosphoribosyltransferase activity CC (in vitro). Binds GMP, IMP and alpha-D-5-phosphoribosyl 1-pyrophosphate CC (PRPP). Is not expected to contribute to purine metabolism or GMP CC salvage. CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:21054786}. CC -!- INTERACTION: CC Q9NRG1; Q96F85: CNRIP1; NbExp=3; IntAct=EBI-739759, EBI-958255; CC Q9NRG1; Q96G04: EEF2KMT; NbExp=8; IntAct=EBI-739759, EBI-747840; CC Q9NRG1; Q7L775: EPM2AIP1; NbExp=6; IntAct=EBI-739759, EBI-6255981; CC Q9NRG1; Q8NFF5-2: FLAD1; NbExp=3; IntAct=EBI-739759, EBI-11526128; CC Q9NRG1; P46926: GNPDA1; NbExp=3; IntAct=EBI-739759, EBI-749356; CC Q9NRG1; P00492: HPRT1; NbExp=11; IntAct=EBI-739759, EBI-748210; CC Q9NRG1; Q3B8N2: LGALS9B; NbExp=3; IntAct=EBI-739759, EBI-10240775; CC Q9NRG1; Q8TBB1: LNX1; NbExp=3; IntAct=EBI-739759, EBI-739832; CC Q9NRG1; Q9BTE3: MCMBP; NbExp=3; IntAct=EBI-739759, EBI-749378; CC Q9NRG1; Q9BTE3-2: MCMBP; NbExp=6; IntAct=EBI-739759, EBI-9384556; CC Q9NRG1; Q96HA8: NTAQ1; NbExp=3; IntAct=EBI-739759, EBI-741158; CC Q9NRG1; A0A0B4J2F2: SIK1B; NbExp=3; IntAct=EBI-739759, EBI-22345187; CC Q9NRG1; Q9NZD8: SPG21; NbExp=3; IntAct=EBI-739759, EBI-742688; CC Q9NRG1; P56279: TCL1A; NbExp=6; IntAct=EBI-739759, EBI-749995; CC Q9NRG1; O00534: VWA5A; NbExp=3; IntAct=EBI-739759, EBI-12246480; CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=3; CC Name=1; CC IsoId=Q9NRG1-1; Sequence=Displayed; CC Name=2; CC IsoId=Q9NRG1-2; Sequence=VSP_031180; CC Name=3; CC IsoId=Q9NRG1-3; Sequence=VSP_031179; CC -!- SIMILARITY: Belongs to the purine/pyrimidine phosphoribosyltransferase CC family. {ECO:0000305}. CC -!- CAUTION: Lacks the conserved active site Asp and has no significant CC phosphoribosyltransferase activity. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=BAD93029.1; Type=Erroneous initiation; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF226056; AAF86956.1; -; mRNA. DR EMBL; AK021950; BAB13944.1; -; mRNA. DR EMBL; AB209792; BAD93029.1; ALT_INIT; mRNA. DR EMBL; AK222674; BAD96394.1; -; mRNA. DR EMBL; AK294130; BAH11679.1; -; mRNA. DR EMBL; AL157385; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL512598; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH471072; EAW86120.1; -; Genomic_DNA. DR EMBL; BC008662; AAH08662.1; -; mRNA. DR CCDS; CCDS60506.1; -. [Q9NRG1-2] DR CCDS; CCDS7145.1; -. [Q9NRG1-1] DR RefSeq; NP_001269715.1; NM_001282786.1. [Q9NRG1-2] DR RefSeq; NP_064585.1; NM_020200.6. [Q9NRG1-1] DR PDB; 2JBH; X-ray; 1.70 A; A/B=1-225. DR PDBsum; 2JBH; -. DR AlphaFoldDB; Q9NRG1; -. DR SMR; Q9NRG1; -. DR BioGRID; 121276; 39. DR IntAct; Q9NRG1; 31. DR MINT; Q9NRG1; -. DR STRING; 9606.ENSP00000318602; -. DR iPTMnet; Q9NRG1; -. DR PhosphoSitePlus; Q9NRG1; -. DR BioMuta; PRTFDC1; -. DR DMDM; 74752920; -. DR EPD; Q9NRG1; -. DR jPOST; Q9NRG1; -. DR MassIVE; Q9NRG1; -. DR MaxQB; Q9NRG1; -. DR PaxDb; 9606-ENSP00000318602; -. DR PeptideAtlas; Q9NRG1; -. DR ProteomicsDB; 82352; -. [Q9NRG1-1] DR ProteomicsDB; 82353; -. [Q9NRG1-2] DR ProteomicsDB; 82354; -. [Q9NRG1-3] DR Pumba; Q9NRG1; -. DR Antibodypedia; 12431; 294 antibodies from 30 providers. DR DNASU; 56952; -. DR Ensembl; ENST00000320152.11; ENSP00000318602.5; ENSG00000099256.19. [Q9NRG1-1] DR Ensembl; ENST00000376376.3; ENSP00000365556.3; ENSG00000099256.19. [Q9NRG1-3] DR Ensembl; ENST00000376378.5; ENSP00000365558.1; ENSG00000099256.19. [Q9NRG1-2] DR GeneID; 56952; -. DR KEGG; hsa:56952; -. DR MANE-Select; ENST00000320152.11; ENSP00000318602.5; NM_020200.7; NP_064585.1. DR UCSC; uc001ise.3; human. [Q9NRG1-1] DR AGR; HGNC:23333; -. DR CTD; 56952; -. DR DisGeNET; 56952; -. DR GeneCards; PRTFDC1; -. DR HGNC; HGNC:23333; PRTFDC1. DR HPA; ENSG00000099256; Low tissue specificity. DR MIM; 610751; gene. DR neXtProt; NX_Q9NRG1; -. DR OpenTargets; ENSG00000099256; -. DR PharmGKB; PA134888009; -. DR VEuPathDB; HostDB:ENSG00000099256; -. DR eggNOG; KOG3367; Eukaryota. DR GeneTree; ENSGT00940000162225; -. DR HOGENOM; CLU_073615_3_0_1; -. DR InParanoid; Q9NRG1; -. DR OMA; VIFMEDI; -. DR OrthoDB; 4216383at2759; -. DR PhylomeDB; Q9NRG1; -. DR TreeFam; TF313367; -. DR PathwayCommons; Q9NRG1; -. DR SignaLink; Q9NRG1; -. DR BioGRID-ORCS; 56952; 6 hits in 1150 CRISPR screens. DR ChiTaRS; PRTFDC1; human. DR EvolutionaryTrace; Q9NRG1; -. DR GenomeRNAi; 56952; -. DR Pharos; Q9NRG1; Tbio. DR PRO; PR:Q9NRG1; -. DR Proteomes; UP000005640; Chromosome 10. DR RNAct; Q9NRG1; Protein. DR Bgee; ENSG00000099256; Expressed in corpus callosum and 174 other cell types or tissues. DR GO; GO:0005829; C:cytosol; IBA:GO_Central. DR GO; GO:0000287; F:magnesium ion binding; TAS:UniProtKB. DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW. DR GO; GO:0042803; F:protein homodimerization activity; IPI:UniProtKB. DR GO; GO:0006166; P:purine ribonucleoside salvage; IEA:InterPro. DR CDD; cd06223; PRTases_typeI; 1. DR Gene3D; 3.40.50.2020; -; 1. DR InterPro; IPR005904; Hxn_phspho_trans. DR InterPro; IPR000836; PRibTrfase_dom. DR InterPro; IPR029057; PRTase-like. DR NCBIfam; TIGR01203; HGPRTase; 1. DR PANTHER; PTHR43340; HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE; 1. DR PANTHER; PTHR43340:SF5; PHOSPHORIBOSYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1; 1. DR Pfam; PF00156; Pribosyltran; 1. DR SUPFAM; SSF53271; PRTase-like; 1. DR Genevisible; Q9NRG1; HS. PE 1: Evidence at protein level; KW 3D-structure; Acetylation; Alternative splicing; Magnesium; Metal-binding; KW Nucleotide-binding; Reference proteome. FT INIT_MET 1 FT /note="Removed" FT /evidence="ECO:0007744|PubMed:19413330, FT ECO:0007744|PubMed:22814378" FT CHAIN 2..225 FT /note="Phosphoribosyltransferase domain-containing protein FT 1" FT /id="PRO_0000318176" FT BINDING 141..149 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0000269|PubMed:21054786" FT BINDING 141 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /evidence="ECO:0000305" FT BINDING 142 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /evidence="ECO:0000305" FT BINDING 173 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0000269|PubMed:21054786" FT BINDING 194..195 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0000269|PubMed:21054786" FT BINDING 201 FT /ligand="GMP" FT /ligand_id="ChEBI:CHEBI:58115" FT /evidence="ECO:0000269|PubMed:21054786" FT BINDING 201 FT /ligand="Mg(2+)" FT /ligand_id="ChEBI:CHEBI:18420" FT /evidence="ECO:0000305" FT MOD_RES 2 FT /note="N-acetylalanine" FT /evidence="ECO:0007744|PubMed:19413330, FT ECO:0007744|PubMed:22814378" FT VAR_SEQ 114..225 FT /note="NDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMI FT KVASLLVKRTSRSDGFRPDYAGFEIPNLFVVGYALDYNEYFRDLNHICVINEHGKEKYR FT V -> LRARLKRTTICDRGGLAFSQGYMSSCAPLQESPNTLWRGYLQVLIPCFHIRFQL FT PRSEQN (in isoform 3)" FT /evidence="ECO:0000305" FT /id="VSP_031179" FT VAR_SEQ 185..225 FT /note="YAGFEIPNLFVVGYALDYNEYFRDLNHICVINEHGKEKYRV -> SHMRHQ FT (in isoform 2)" FT /evidence="ECO:0000303|PubMed:14702039" FT /id="VSP_031180" FT CONFLICT 39 FT /note="L -> W (in Ref. 3; BAD93029)" FT /evidence="ECO:0000305" FT CONFLICT 65 FT /note="G -> R (in Ref. 3; BAD96394)" FT /evidence="ECO:0000305" FT HELIX 11..13 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 26..28 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 33..35 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 38..44 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 46..64 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 69..75 FT /evidence="ECO:0007829|PDB:2JBH" FT TURN 76..78 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 79..95 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 102..109 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 111..113 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 123..127 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 129..132 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 135..147 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 148..158 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 163..173 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 184..190 FT /evidence="ECO:0007829|PDB:2JBH" FT STRAND 210..215 FT /evidence="ECO:0007829|PDB:2JBH" FT HELIX 217..222 FT /evidence="ECO:0007829|PDB:2JBH" SQ SEQUENCE 225 AA; 25674 MW; CD612C2783AC3071 CRC64; MAGSSEEAPD YGRGVVIMDD WPGYDLNLFT YPQHYYGDLE YVLIPHGIIV DRIERLAKDI MKDIGYSDIM VLCVLKGGYK FCADLVEHLK NISRNSDRFV SMKVDFIRLK SYRNDQSMGE MQIIGGDDLS TLAGKNVLIV EDVVGTGRTM KALLSNIEKY KPNMIKVASL LVKRTSRSDG FRPDYAGFEI PNLFVVGYAL DYNEYFRDLN HICVINEHGK EKYRV //