Q9NRF2 (SH2B1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 96.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: SH2B adapter protein 1 Alternative name(s): Pro-rich, PH and SH2 domain-containing signaling mediator Short name=PSM SH2 domain-containing protein 1B | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 756 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Adapter protein for several members of the tyrosine kinase receptor family. Involved in multiple signaling pathways mediated by Janus kinase (JAK) and receptor tyrosine kinases, including the receptors of insulin (INS), insulin-like growth factor I (IGF1), nerve growth factor (NGF), brain-derived neurotrophic factor (BDNF), glial cell line-derived neurotrophic factor (GDNF), platelet-derived growth factor (PDGF) and fibroblast growth factors (FGFs). In growth hormone (GH) signaling, autophosphorylated ('Tyr-813') JAK2 recruits SH2B1, which in turn is phosphorylated by JAK2 on tyrosine residues. These phosphotyrosines form potential binding sites for other signaling proteins. GH also promotes serine/threonine phosphorylation of SH2B1 and these phosphorylated residues may serve to recruit other proteins to the GHR-JAK2-SH2B1 complexes, such as RAC1. In leptin (LEP) signaling, binds to and potentiates the activation of JAK2 by globally enhancing downstream pathways. In response to leptin, binds simultaneously to both, JAK2 and IRS1 or IRS2, thus mediating formation of a complex of JAK2, SH2B1 and IRS1 or IRS2. Mediates tyrosine phosphorylation of IRS1 and IRS2, resulting in activation of the PI 3-kinase pathway. Acts as positive regulator of NGF-mediated activation of the Akt/Forkhead pathway; prolongs NGF-induced phosphorylation of AKT1 on 'Ser-473' and AKT1 enzymatic activity. Enhances the kinase activity of the cytokine receptor-associated tyrosine kinase JAK2 and of other receptor tyrosine kinases, such as FGFR3 and NTRK1. For JAK2, the mechanism seems to involve dimerization of both, SH2B1 and JAK2. Enhances RET phosphorylation and kinase activity. Isoforms seem to be differentially involved in IGF-I and PDGF-induced mitogenesis By similarity. Ref.1 Ref.8 Ref.9 Ref.12 Ref.13 Ref.14 Ref.15 |
| Subunit structure | Self-associates. Homopentamer By similarity. Forms a heteromultimeric complex with SH2B2 By similarity. Interacts with SH2B2. Isoform 1 interacts via its SH2 domain with JAK2. Isoform 2 interacts via its SH2 domain and its N-terminus with JAK2; the SH2 domain is required for the major interaction with JAK2 phosphorylated on tyrosine residues; the N-terminus provides a low-affinity binding to JAK2 independent of JAK2 phosphorylation. Isoform 3 interacts via its SH2 domain with JAK2. Isoform 1 interacts via its SH2 domain with INSR; the interaction requires receptor activation. Isoform 3 interacts via its SH2 domain with INSR; the interaction requires receptor activation and requires INSR phosphorylation at 'Tyr-1185'. Isoform 1 interacts with IGF1R; the interaction requires receptor activation. Isoform 2 interacts with PRKAR1A/RET (PTC2) fusion protein; the interaction requires RET 'Tyr-905' and Tyr-981'. Isoform 2 interacts via its SH2 domain with FGFR3; the interaction requires FGFR3 'Tyr-724' and 'Tyr-760'. Isoform 2 interacts with RET; the interaction requires RET kinase activity and RET 'Tyr-981'. Isoform 2 interacts with RAC1. Isoform 2 interacts with PDGFRA and/or PDGFRB; the interaction requires receptor activation. Interacts with ISR1 and ISR2. Isoform 3 is probably part of a complex consisting of INSR, ISR1 and SH2B1. Probably part of a ternary complex consisting of SH2B1, JAK2 and ISR1 or ISR2. May interact with FCER1G By similarity. Interacts (via SH2 domain) with NTRK1 (phosphorylated) By similarity. Ref.1 Ref.7 Ref.8 Ref.9 Ref.10 Ref.11 Ref.12 Ref.14 Ref.15 |
| Subcellular location | Cytoplasm By similarity. Membrane Probable. Nucleus By similarity. Note: Shuttles between the nucleus and the cytoplasm By similarity. |
| Tissue specificity | Widely expressed with highest levels in skeletal muscle and ovary. Ref.1 |
| Post-translational modification | Phosphorylated on tyrosine residues in response to receptor kinase stimulation. Phosphorylated by RET. Ref.1 Ref.8 Ref.11 |
| Sequence similarities | Belongs to the SH2B adapter family. Contains 1 PH domain. Contains 1 SH2 domain. |
| Sequence caution | The sequence AAH10704.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAA92537.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence BAB55148.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9NRF2-1) Also known as: Alpha; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9NRF2-2) Also known as: Beta; The sequence of this isoform differs from the canonical sequence as follows: 633-756: EPTTSHDPPQ...RAINNQYSFV → GREQAGSHAG...ASDCVTDHLP | ||||||
| Isoform 3 (identifier: Q9NRF2-3) Also known as: Gamma; The sequence of this isoform differs from the canonical sequence as follows: 633-756: EPTTSHDPPQ...RAINNQYSFV → GEQSRSAGEE...PSCPSERVTV |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 756 | 756 | SH2B adapter protein 1 | PRO_0000323593 | |||||
Regions | |||||||||
| Domain | 267 – 376 | 110 | PH | ||||||
| Domain | 527 – 625 | 99 | SH2 | ||||||
| Region | 1 – 555 | 555 | Interaction with JAK2 (low-affinity binding; independent of JAK2 phosphorylation) By similarity | ||||||
| Region | 24 – 85 | 62 | Required for self-association | ||||||
| Region | 85 – 196 | 112 | Interaction with RAC1 By similarity | ||||||
| Region | 100 – 243 | 144 | Required for NGF signaling By similarity | ||||||
| Region | 224 – 233 | 10 | Required for nuclear localization By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 88 | 1 | Phosphoserine | ||||||
| Modified residue | 96 | 1 | Phosphoserine Ref.16 Ref.17 | ||||||
| Modified residue | 125 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 126 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 439 | 1 | Phosphotyrosine; by JAK1, JAK2 and PDGFR By similarity | ||||||
| Modified residue | 494 | 1 | Phosphotyrosine; by JAK1, JAK2 By similarity | ||||||
| Modified residue | 624 | 1 | Phosphotyrosine | ||||||
Natural variations | |||||||||
| Alternative sequence | 633 – 756 | 124 | EPTTS…QYSFV → GREQAGSHAGVCEGDGCHPD ASCTLMPFGASDCVTDHLP in isoform 2. | VSP_032027 | |||||
| Alternative sequence | 633 – 756 | 124 | EPTTS…QYSFV → GEQSRSAGEEVPVHPRSEAG SRLGAMRGCAREMDATPMPP APSCPSERVTV in isoform 3. | VSP_032028 | |||||
| Natural variant | 484 | 1 | T → A. Ref.1 Ref.4 Corresponds to variant rs7498665 [ dbSNP | Ensembl ]. | VAR_039550 | |||||
| Natural variant | 541 | 1 | V → A. Ref.2 Corresponds to variant rs17850682 [ dbSNP | Ensembl ]. | VAR_039551 | |||||
Experimental info | |||||||||
| Mutagenesis | 29 | 1 | F → R: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 34 | 1 | A → D: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 38 | 1 | A → D: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 41 | 1 | F → A: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 42 | 1 | A → D: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 48 | 1 | Y → A: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 68 | 1 | F → A: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 72 | 1 | F → A: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Mutagenesis | 555 | 1 | R → A: Abolishes self-association and interaction with INSR and IGF1R. Ref.1 | ||||||
| Sequence conflict | 197 | 1 | N → D in BAF83021. Ref.3 | ||||||
| Sequence conflict | 519 | 1 | D → G in BAF83021. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Kinase activation through dimerization by human SH2-B." Nishi M., Werner E.D., Oh B.C., Frantz J.D., Dhe-Paganon S., Hansen L., Lee J., Shoelson S.E. Mol. Cell. Biol. 25:2607-2621(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1; 2 AND 3), FUNCTION IN JAK2 ACTIVATION, SELF-ASSOCIATION, INTERACTION WITH JAK2; SH2B2; INSR AND IGF1R, PHOSPHORYLATION, TISSUE SPECIFICITY, MUTAGENESIS OF PHE-29; ALA-34; ALA-38; PHE-41; ALA-42; TYR-48; PHE-68; PHE-72 AND ARG-555, VARIANT ALA-484. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O. DNA Res. 7:65-73(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), VARIANT ALA-541. Tissue: Brain. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Teratocarcinoma and Tongue. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 144-756 (ISOFORM 3), VARIANT ALA-484. Tissue: Mammary cancer. |
| [5] | "The sequence and analysis of duplication-rich human chromosome 16." Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J. Pennacchio L.A.Nature 432:988-994(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 60-756 (ISOFORM 2). Tissue: Eye. |
| [7] | "PSM, an insulin-dependent, pro-rich, PH, SH2 domain containing partner of the insulin receptor." Riedel H., Wang J., Hansen H., Yousaf N. J. Biochem. 122:1105-1113(1997) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH INSR. |
| [8] | "SH2-Balpha is an insulin-receptor adapter protein and substrate that interacts with the activation loop of the insulin-receptor kinase." Kotani K., Wilden P., Pillay T.S. Biochem. J. 335:103-109(1998) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH INSR, PHOSPHORYLATION. |
| [9] | "Platelet-derived growth factor (PDGF) stimulates the association of SH2-Bbeta with PDGF receptor and phosphorylation of SH2-Bbeta." Rui L., Carter-Su C. J. Biol. Chem. 273:21239-21245(1998) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN PDGF SIGNALING, INTERACTION WITH PDGFRA/B. |
| [10] | "Alternative splicing, gene localization, and binding of SH2-B to the insulin receptor kinase domain." Nelms K., O'Neill T.J., Li S., Hubbard S.R., Gustafson T.A., Paul W.E. Mamm. Genome 10:1160-1167(1999) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH INSR AND ISR1. |
| [11] | "SH2-B family members differentially regulate JAK family tyrosine kinases." O'Brien K.B., O'Shea J.J., Carter-Su C. J. Biol. Chem. 277:8673-8681(2002) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH JAK1; JAK2 AND JAK3, PHOSPHORYLATION. |
| [12] | "Interaction of fibroblast growth factor receptor 3 and the adapter protein SH2-B. A role in STAT5 activation." Kong M., Wang C.S., Donoghue D.J. J. Biol. Chem. 277:15962-15970(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN FGF SIGNALING, INTERACTION WITH FGFR3. |
| [13] | "SH2-B is a positive regulator of nerve growth factor-mediated activation of the Akt/Forkhead pathway in PC12 cells." Wang X., Chen L., Maures T.J., Herrington J., Carter-Su C. J. Biol. Chem. 279:133-141(2004) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN NGF SIGNALING. |
| [14] | "Interaction of SH2-Bbeta with RET is involved in signaling of GDNF-induced neurite outgrowth." Zhang Y., Zhu W., Wang Y.G., Liu X.J., Jiao L., Liu X., Zhang Z.H., Lu C.L., He C. J. Cell Sci. 119:1666-1676(2006) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN GDNF SIGNALING, INTERACTION WITH RET. |
| [15] | "SH2B1beta adaptor is a key enhancer of RET tyrosine kinase signaling." Donatello S., Fiorino A., Degl'Innocenti D., Alberti L., Miranda C., Gorla L., Bongarzone I., Rizzetti M.G., Pierotti M.A., Borrello M.G. Oncogene 26:6546-6559(2007) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION IN RET SIGNALING, INTERACTION WITH PRKAR1A/RET. |
| [16] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-96, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [17] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-96, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF227967 mRNA. Translation: AAF73912.1. AF227968 mRNA. Translation: AAF73913.1. AF227969 mRNA. Translation: AAF73914.1. AB037720 mRNA. Translation: BAA92537.1. Different initiation. AK027488 mRNA. Translation: BAB55148.1. Different initiation. AK290332 mRNA. Translation: BAF83021.1. AL049924 mRNA. Translation: CAB43208.1. AL713760 mRNA. Translation: CAD28530.1. AC133550 Genomic DNA. No translation available. BC010704 mRNA. Translation: AAH10704.1. Different initiation. |
| IPI | IPI00016441. IPI00292988. IPI00385535. |
| PIR | T08662. |
| RefSeq | NP_001139267.1. NM_001145795.1. NP_001139268.1. NM_001145796.1. NP_001139269.1. NM_001145797.1. NP_001139284.1. NM_001145812.1. NP_056318.2. NM_015503.2. |
| UniGene | Hs.15744. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1RQQ based on UniProtKB Q9Z200. |
| ProteinModelPortal | Q9NRF2. |
| SMR | Q9NRF2. Positions 24-82, 247-379, 520-654. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9NRF2. 2 interactions. |
| MINT | MINT-1494470. |
| STRING | 9606.ENSP00000337163. |
PTM databases | |
| PhosphoSite | Q9NRF2. |
Polymorphism databases | |
| DMDM | 172046610. |
Proteomic databases | |
| PaxDb | Q9NRF2. |
| PRIDE | Q9NRF2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000322610; ENSP00000321221; ENSG00000178188. ENST00000337120; ENSP00000337163; ENSG00000178188. ENST00000359285; ENSP00000352232; ENSG00000178188. ENST00000395532; ENSP00000378903; ENSG00000178188. |
| GeneID | 25970. |
| KEGG | hsa:25970. |
| UCSC | uc002dri.3. human. uc002drj.3. human. uc002drk.3. human. |
Organism-specific databases | |
| CTD | 25970. |
| GeneCards | GC16P028875. |
| H-InvDB | HIX0017272. |
| HGNC | HGNC:30417. SH2B1. |
| MIM | 608937. gene. |
| neXtProt | NX_Q9NRF2. |
| Orphanet | 261197. 16p11.2 microdeletion syndrome. 261222. Distal 16p11.2 microdeletion syndrome. |
| PharmGKB | PA145148084. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG77816. |
| HOVERGEN | HBG006707. |
| InParanoid | Q9NRF2. |
| KO | K12459. |
| OMA | DGAGMVQ. |
| OrthoDB | EOG4ZPDV6. |
| PhylomeDB | Q9NRF2. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | trkrpathway. Neurotrophic factor-mediated Trk receptor signaling. |
| Reactome | REACT_111102. Signal Transduction. REACT_604. Hemostasis. REACT_6900. Immune System. |
Gene expression databases | |
| ArrayExpress | Q9NRF2. |
| Bgee | Q9NRF2. |
| CleanEx | HS_SH2B1. |
| Genevestigator | Q9NRF2. |
Family and domain databases | |
| Gene3D | 2.30.29.30. 1 hit. 3.30.505.10. 1 hit. |
| InterPro | IPR011993. PH_like_dom. IPR015012. Phe_ZIP. IPR001849. Pleckstrin_homology. IPR000980. SH2. [Graphical view] |
| Pfam | PF00169. PH. 1 hit. PF08916. Phe_ZIP. 1 hit. PF00017. SH2. 1 hit. [Graphical view] |
| PRINTS | PR00401. SH2DOMAIN. |
| SMART | SM00233. PH. 1 hit. SM00252. SH2. 1 hit. [Graphical view] |
| SUPFAM | SSF109805. Phe_ZIP. 1 hit. |
| PROSITE | PS50003. PH_DOMAIN. False negative. PS50001. SH2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 25970. |
| NextBio | 47602. |
| SOURCE | Search... |
Entry information
| Entry name | SH2B1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9NRF2 Secondary accession number(s): A8K2R7 Q9Y3Y3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 16 Human chromosome 16: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
