ID C1QR1_HUMAN Reviewed; 652 AA. AC Q9NPY3; O00274; DT 20-JUN-2002, integrated into UniProtKB/Swiss-Prot. DT 11-JUL-2002, sequence version 3. DT 27-MAR-2024, entry version 207. DE RecName: Full=Complement component C1q receptor; DE AltName: Full=C1q/MBL/SPA receptor; DE Short=C1qR; DE Short=C1qR(p); DE Short=C1qRp; DE AltName: Full=CDw93; DE AltName: Full=Complement component 1 q subcomponent receptor 1; DE AltName: Full=Matrix-remodeling-associated protein 4; DE AltName: CD_antigen=CD93; DE Flags: Precursor; GN Name=CD93; Synonyms=C1QR1, MXRA4; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE, AND VARIANT SER-541. RX PubMed=9047234; DOI=10.1016/s1074-7613(00)80419-7; RA Nepomuceno R.R., Henschen-Edman A.H., Burgess W.H., Tenner A.J.; RT "cDNA cloning and primary structure analysis of C1qR(P), the human RT C1q/MBL/SPA receptor that mediates enhanced phagocytosis in vitro."; RL Immunity 6:119-129(1997). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT ALA-318. RX PubMed=11781389; RA Steinberger P., Szekeres A., Wille S., Stockl J., Selenko N., Prager E., RA Staffler G., Madic O., Stockinger H., Knapp W.; RT "Identification of human CD93 as the phagocytic C1q receptor (C1qRp) by RT expression cloning."; RL J. Leukoc. Biol. 71:133-140(2002). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=11780052; DOI=10.1038/414865a; RA Deloukas P., Matthews L.H., Ashurst J.L., Burton J., Gilbert J.G.R., RA Jones M., Stavrides G., Almeida J.P., Babbage A.K., Bagguley C.L., RA Bailey J., Barlow K.F., Bates K.N., Beard L.M., Beare D.M., Beasley O.P., RA Bird C.P., Blakey S.E., Bridgeman A.M., Brown A.J., Buck D., Burrill W.D., RA Butler A.P., Carder C., Carter N.P., Chapman J.C., Clamp M., Clark G., RA Clark L.N., Clark S.Y., Clee C.M., Clegg S., Cobley V.E., Collier R.E., RA Connor R.E., Corby N.R., Coulson A., Coville G.J., Deadman R., Dhami P.D., RA Dunn M., Ellington A.G., Frankland J.A., Fraser A., French L., Garner P., RA Grafham D.V., Griffiths C., Griffiths M.N.D., Gwilliam R., Hall R.E., RA Hammond S., Harley J.L., Heath P.D., Ho S., Holden J.L., Howden P.J., RA Huckle E., Hunt A.R., Hunt S.E., Jekosch K., Johnson C.M., Johnson D., RA Kay M.P., Kimberley A.M., King A., Knights A., Laird G.K., Lawlor S., RA Lehvaeslaiho M.H., Leversha M.A., Lloyd C., Lloyd D.M., Lovell J.D., RA Marsh V.L., Martin S.L., McConnachie L.J., McLay K., McMurray A.A., RA Milne S.A., Mistry D., Moore M.J.F., Mullikin J.C., Nickerson T., RA Oliver K., Parker A., Patel R., Pearce T.A.V., Peck A.I., RA Phillimore B.J.C.T., Prathalingam S.R., Plumb R.W., Ramsay H., Rice C.M., RA Ross M.T., Scott C.E., Sehra H.K., Shownkeen R., Sims S., Skuce C.D., RA Smith M.L., Soderlund C., Steward C.A., Sulston J.E., Swann R.M., RA Sycamore N., Taylor R., Tee L., Thomas D.W., Thorpe A., Tracey A., RA Tromans A.C., Vaudin M., Wall M., Wallis J.M., Whitehead S.L., RA Whittaker P., Willey D.L., Williams L., Williams S.A., Wilming L., RA Wray P.W., Hubbard T., Durbin R.M., Bentley D.R., Beck S., Rogers J.; RT "The DNA sequence and comparative analysis of human chromosome 20."; RL Nature 414:865-871(2001). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Leukocyte; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [5] RP INTERACTION WITH C1QBP. RX PubMed=9233640; RA Ghebrehiwet B., Lu P.D., Zhang W., Keilbaugh S.A., Leigh L.E., Eggleton P., RA Reid K.B., Peerschke E.I.; RT "Evidence that the two C1q binding membrane proteins, gC1q-R and cC1q-R, RT associate to form a complex."; RL J. Immunol. 159:1429-1436(1997). RN [6] RP CHARACTERIZATION. RX PubMed=11994479; DOI=10.4049/jimmunol.168.10.5222; RA McGreal E.P., Ikewaki N., Akatsu H., Morgan B.P., Gasque P.; RT "Human C1qRp is identical with CD93 and the mNI-11 antigen but does not RT bind C1q."; RL J. Immunol. 168:5222-5232(2002). RN [7] RP GLYCOSYLATION. RX PubMed=10092817; RA Nepomuceno R.R., Ruiz S., Park M., Tenner A.J.; RT "C1qRP is a heavily O-glycosylated cell surface protein involved in the RT regulation of phagocytic activity."; RL J. Immunol. 162:3583-3589(1999). RN [8] RP INTERACTION WITH HCV CORE PROTEIN (MICROBIAL INFECTION). RX PubMed=11086025; DOI=10.1172/jci10323; RA Kittlesen D.J., Chianese-Bullock K.A., Yao Z.Q., Braciale T.J., Hahn Y.S.; RT "Interaction between complement receptor gC1qR and hepatitis C virus core RT protein inhibits T-lymphocyte proliferation."; RL J. Clin. Invest. 106:1239-1249(2000). RN [9] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=25944712; DOI=10.1002/pmic.201400617; RA Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D., RA Lane L., Bairoch A., Van Dorsselaer A., Carapito C.; RT "N-terminome analysis of the human mitochondrial proteome."; RL Proteomics 15:2519-2524(2015). RN [10] RP VARIANT [LARGE SCALE ANALYSIS] VAL-220. RX PubMed=16959974; DOI=10.1126/science.1133427; RA Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., RA Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., RA Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V., RA Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H., RA Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W., RA Velculescu V.E.; RT "The consensus coding sequences of human breast and colorectal cancers."; RL Science 314:268-274(2006). CC -!- FUNCTION: Receptor (or element of a larger receptor complex) for C1q, CC mannose-binding lectin (MBL2) and pulmonary surfactant protein A (SPA). CC May mediate the enhancement of phagocytosis in monocytes and CC macrophages upon interaction with soluble defense collagens. May play a CC role in intercellular adhesion. CC -!- SUBUNIT: Interacts with C1QBP; the association may represent a cell CC surface C1q receptor. {ECO:0000269|PubMed:9233640}. CC -!- SUBUNIT: (Microbial infection) Interacts with hepatitis virus C/HCV CC core protein. {ECO:0000269|PubMed:11086025}. CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane protein. CC -!- TISSUE SPECIFICITY: Highly expressed in endothelial cells, platelets, CC cells of myeloid origin, such as monocytes and neutrophils. Not CC expressed in cells of lymphoid origin. CC -!- PTM: N- and O-glycosylated. {ECO:0000269|PubMed:10092817}. CC -!- CAUTION: Has been sometimes referred to as a collectin receptor. CC {ECO:0000305}. CC -!- CAUTION: PubMed:11994479 reported that C1q is not a ligand for C1QR1. CC {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; U94333; AAB53110.1; -; mRNA. DR EMBL; AL118508; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC028075; AAH28075.1; -; mRNA. DR CCDS; CCDS13149.1; -. DR RefSeq; NP_036204.2; NM_012072.3. DR PDB; 8A59; X-ray; 1.92 A; A=22-257. DR PDBsum; 8A59; -. DR AlphaFoldDB; Q9NPY3; -. DR SMR; Q9NPY3; -. DR BioGRID; 116580; 30. DR IntAct; Q9NPY3; 18. DR STRING; 9606.ENSP00000246006; -. DR UniLectin; Q9NPY3; -. DR GlyCosmos; Q9NPY3; 3 sites, 1 glycan. DR GlyGen; Q9NPY3; 5 sites, 2 O-linked glycans (4 sites). DR iPTMnet; Q9NPY3; -. DR PhosphoSitePlus; Q9NPY3; -. DR BioMuta; CD93; -. DR DMDM; 21759074; -. DR jPOST; Q9NPY3; -. DR MassIVE; Q9NPY3; -. DR PaxDb; 9606-ENSP00000246006; -. DR PeptideAtlas; Q9NPY3; -. DR ProteomicsDB; 82049; -. DR TopDownProteomics; Q9NPY3; -. DR ABCD; Q9NPY3; 1 sequenced antibody. DR Antibodypedia; 2408; 609 antibodies from 33 providers. DR DNASU; 22918; -. DR Ensembl; ENST00000246006.5; ENSP00000246006.4; ENSG00000125810.10. DR GeneID; 22918; -. DR KEGG; hsa:22918; -. DR MANE-Select; ENST00000246006.5; ENSP00000246006.4; NM_012072.4; NP_036204.2. DR UCSC; uc002wsv.4; human. DR AGR; HGNC:15855; -. DR CTD; 22918; -. DR DisGeNET; 22918; -. DR GeneCards; CD93; -. DR HGNC; HGNC:15855; CD93. DR HPA; ENSG00000125810; Tissue enhanced (placenta). DR MIM; 120577; gene. DR neXtProt; NX_Q9NPY3; -. DR OpenTargets; ENSG00000125810; -. DR PharmGKB; PA25627; -. DR VEuPathDB; HostDB:ENSG00000125810; -. DR eggNOG; ENOG502QUVB; Eukaryota. DR GeneTree; ENSGT00940000156996; -. DR HOGENOM; CLU_027075_1_0_1; -. DR InParanoid; Q9NPY3; -. DR OMA; YCWVSSG; -. DR OrthoDB; 19806at2759; -. DR PhylomeDB; Q9NPY3; -. DR TreeFam; TF330714; -. DR PathwayCommons; Q9NPY3; -. DR Reactome; R-HSA-6798695; Neutrophil degranulation. DR SignaLink; Q9NPY3; -. DR BioGRID-ORCS; 22918; 19 hits in 1147 CRISPR screens. DR GeneWiki; CD93; -. DR GenomeRNAi; 22918; -. DR Pharos; Q9NPY3; Tbio. DR PRO; PR:Q9NPY3; -. DR Proteomes; UP000005640; Chromosome 20. DR RNAct; Q9NPY3; Protein. DR Bgee; ENSG00000125810; Expressed in visceral pleura and 194 other cell types or tissues. DR GO; GO:0009986; C:cell surface; IEA:Ensembl. DR GO; GO:0101003; C:ficolin-1-rich granule membrane; TAS:Reactome. DR GO; GO:0005886; C:plasma membrane; IDA:LIFEdb. DR GO; GO:0030667; C:secretory granule membrane; TAS:Reactome. DR GO; GO:0035579; C:specific granule membrane; TAS:Reactome. DR GO; GO:0070821; C:tertiary granule membrane; TAS:Reactome. DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro. DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW. DR GO; GO:0001849; F:complement component C1q complex binding; IDA:UniProtKB. DR GO; GO:0038023; F:signaling receptor activity; NAS:UniProtKB. DR GO; GO:0098609; P:cell-cell adhesion; IDA:UniProtKB. DR GO; GO:0042116; P:macrophage activation; NAS:UniProtKB. DR GO; GO:0006909; P:phagocytosis; NAS:UniProtKB. DR CDD; cd03600; CLECT_thrombomodulin_like; 1. DR CDD; cd00054; EGF_CA; 3. DR Gene3D; 2.10.25.10; Laminin; 5. DR Gene3D; 3.10.100.10; Mannose-Binding Protein A, subunit A; 1. DR InterPro; IPR001304; C-type_lectin-like. DR InterPro; IPR016186; C-type_lectin-like/link_sf. DR InterPro; IPR026823; cEGF. DR InterPro; IPR016187; CTDL_fold. DR InterPro; IPR001881; EGF-like_Ca-bd_dom. DR InterPro; IPR000742; EGF-like_dom. DR InterPro; IPR000152; EGF-type_Asp/Asn_hydroxyl_site. DR InterPro; IPR018097; EGF_Ca-bd_CS. DR InterPro; IPR009030; Growth_fac_rcpt_cys_sf. DR PANTHER; PTHR14789:SF7; CD93 MOLECULE; 1. DR PANTHER; PTHR14789; CHONDROLECTIN VARIANT CHODLFDELTAE; 1. DR Pfam; PF12662; cEGF; 1. DR Pfam; PF07645; EGF_CA; 2. DR Pfam; PF00059; Lectin_C; 1. DR SMART; SM00034; CLECT; 1. DR SMART; SM00181; EGF; 5. DR SMART; SM00179; EGF_CA; 5. DR SUPFAM; SSF56436; C-type lectin-like; 1. DR SUPFAM; SSF57196; EGF/Laminin; 2. DR SUPFAM; SSF57184; Growth factor receptor domain; 1. DR PROSITE; PS00010; ASX_HYDROXYL; 3. DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1. DR PROSITE; PS01186; EGF_2; 3. DR PROSITE; PS50026; EGF_3; 3. DR PROSITE; PS01187; EGF_CA; 3. DR Genevisible; Q9NPY3; HS. PE 1: Evidence at protein level; KW 3D-structure; Cell adhesion; Direct protein sequencing; Disulfide bond; KW EGF-like domain; Glycoprotein; Host-virus interaction; Lectin; Membrane; KW Phosphoprotein; Receptor; Reference proteome; Repeat; Signal; KW Transmembrane; Transmembrane helix. FT SIGNAL 1..21 FT CHAIN 22..652 FT /note="Complement component C1q receptor" FT /id="PRO_0000017367" FT TOPO_DOM 24..580 FT /note="Extracellular" FT /evidence="ECO:0000255" FT TRANSMEM 581..601 FT /note="Helical" FT /evidence="ECO:0000255" FT TOPO_DOM 602..652 FT /note="Cytoplasmic" FT /evidence="ECO:0000255" FT DOMAIN 32..174 FT /note="C-type lectin" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DOMAIN 260..301 FT /note="EGF-like 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT DOMAIN 302..344 FT /note="EGF-like 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT DOMAIN 345..384 FT /note="EGF-like 3; calcium-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT DOMAIN 385..426 FT /note="EGF-like 4; calcium-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT DOMAIN 427..468 FT /note="EGF-like 5; calcium-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT REGION 472..546 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 553..572 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 611..652 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 506..527 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOD_RES 627 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q9ET61" FT MOD_RES 644 FT /note="Phosphotyrosine" FT /evidence="ECO:0000250|UniProtKB:O89103" FT CARBOHYD 325 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT DISULFID 141..165 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 264..275 FT /evidence="ECO:0000250" FT DISULFID 271..285 FT /evidence="ECO:0000250" FT DISULFID 287..300 FT /evidence="ECO:0000250" FT DISULFID 306..317 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 311..328 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 330..343 FT /evidence="ECO:0000250" FT DISULFID 349..358 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 354..367 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 369..383 FT /evidence="ECO:0000250" FT DISULFID 389..400 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 396..409 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 411..425 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040" FT DISULFID 431..443 FT /evidence="ECO:0000250" FT DISULFID 439..452 FT /evidence="ECO:0000250" FT DISULFID 454..467 FT /evidence="ECO:0000250" FT VARIANT 220 FT /note="A -> V (in a colorectal cancer sample; somatic FT mutation; dbSNP:rs138932459)" FT /evidence="ECO:0000269|PubMed:16959974" FT /id="VAR_036400" FT VARIANT 318 FT /note="V -> A" FT /evidence="ECO:0000269|PubMed:11781389" FT /id="VAR_013573" FT VARIANT 541 FT /note="P -> S (in dbSNP:rs3746731)" FT /evidence="ECO:0000269|PubMed:9047234" FT /id="VAR_050102" FT CONFLICT 22 FT /note="T -> V (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 36 FT /note="C -> T (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 38..39 FT /note="TA -> RI (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 155 FT /note="S -> N (in Ref. 1; AAB53110)" FT /evidence="ECO:0000305" FT CONFLICT 186 FT /note="G -> A (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 492 FT /note="S -> A (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 496 FT /note="R -> Q (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT CONFLICT 504 FT /note="R -> G (in Ref. 1; AA sequence)" FT /evidence="ECO:0000305" FT STRAND 29..32 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 35..41 FT /evidence="ECO:0007829|PDB:8A59" FT HELIX 46..55 FT /evidence="ECO:0007829|PDB:8A59" FT HELIX 66..82 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 89..99 FT /evidence="ECO:0007829|PDB:8A59" FT TURN 110..113 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 136..138 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 140..147 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 159..163 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 175..183 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 198..202 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 213..216 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 220..224 FT /evidence="ECO:0007829|PDB:8A59" FT STRAND 237..239 FT /evidence="ECO:0007829|PDB:8A59" SQ SEQUENCE 652 AA; 68560 MW; EECA0FEAC55FCAC2 CRC64; MATSMGLLLL LLLLLTQPGA GTGADTEAVV CVGTACYTAH SGKLSAAEAQ NHCNQNGGNL ATVKSKEEAQ HVQRVLAQLL RREAALTARM SKFWIGLQRE KGKCLDPSLP LKGFSWVGGG EDTPYSNWHK ELRNSCISKR CVSLLLDLSQ PLLPSRLPKW SEGPCGSPGS PGSNIEGFVC KFSFKGMCRP LALGGPGQVT YTTPFQTTSS SLEAVPFASA ANVACGEGDK DETQSHYFLC KEKAPDVFDW GSSGPLCVSP KYGCNFNNGG CHQDCFEGGD GSFLCGCRPG FRLLDDLVTC ASRNPCSSSP CRGGATCVLG PHGKNYTCRC PQGYQLDSSQ LDCVDVDECQ DSPCAQECVN TPGGFRCECW VGYEPGGPGE GACQDVDECA LGRSPCAQGC TNTDGSFHCS CEEGYVLAGE DGTQCQDVDE CVGPGGPLCD SLCFNTQGSF HCGCLPGWVL APNGVSCTMG PVSLGPPSGP PDEEDKGEKE GSTVPRAATA SPTRGPEGTP KATPTTSRPS LSSDAPITSA PLKMLAPSGS PGVWREPSIH HATAASGPQE PAGGDSSVAT QNNDGTDGQK LLLFYILGTV VAILLLLALA LGLLVYRKRR AKREEKKEKK PQNAADSYSW VPERAESRAM ENQYSPTPGT DC //