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Protein

Nucleolar protein of 40 kDa

Gene

ZCCHC17

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri131 – 14818CCHC-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  1. poly(A) RNA binding Source: UniProtKB
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. regulation of mitochondrion degradation Source: ParkinsonsUK-UCL
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleolar protein of 40 kDa
Short name:
pNO40
Alternative name(s):
Pnn-interacting nucleolar protein
Putative S1 RNA-binding domain protein
Short name:
PS1D protein
Zinc finger CCHC domain-containing protein 17
Gene namesi
Name:ZCCHC17
Synonyms:PS1D
ORF Names:HSPC243, HSPC251, LDC4
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 1

Organism-specific databases

HGNCiHGNC:30246. ZCCHC17.

Subcellular locationi

  1. Nucleusnucleolus 1 Publication

GO - Cellular componenti

  1. intermediate filament cytoskeleton Source: HPA
  2. intracellular membrane-bounded organelle Source: HPA
  3. nucleolus Source: UniProtKB-SubCell
  4. nucleus Source: HPA
  5. ribonucleoprotein complex Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA142670539.

Polymorphism and mutation databases

DMDMi73921227.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 241241Nucleolar protein of 40 kDaPRO_0000096902Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei114 – 1141Phosphoserine3 Publications
Modified residuei144 – 1441N6-acetyllysineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQBiQ9NP64.
PaxDbiQ9NP64.
PRIDEiQ9NP64.

PTM databases

PhosphoSiteiQ9NP64.

Expressioni

Gene expression databases

BgeeiQ9NP64.
CleanExiHS_ZCCHC17.
GenevestigatoriQ9NP64.

Organism-specific databases

HPAiHPA028280.
HPA053727.

Interactioni

Subunit structurei

Interacts with PNN. Associates with the 60S ribosomal subunit (By similarity).By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
JMJD6Q6NYC12EBI-746345,EBI-8464037
SDCBPO005605EBI-746345,EBI-727004
SDCBP2Q9H1905EBI-746345,EBI-742426

Protein-protein interaction databases

BioGridi119598. 14 interactions.
IntActiQ9NP64. 8 interactions.
MINTiMINT-1447770.
STRINGi9606.ENSP00000343557.

Structurei

Secondary structure

1
241
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi18 – 2710Combined sources
Beta strandi30 – 345Combined sources
Beta strandi42 – 454Combined sources
Helixi46 – 494Combined sources
Helixi57 – 604Combined sources
Beta strandi66 – 7611Combined sources
Beta strandi81 – 877Combined sources
Beta strandi92 – 943Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2CQONMR-A1-106[»]
SMRiQ9NP64. Positions 5-106.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9NP64.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 8873S1 motifPROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi110 – 1134Poly-Arg
Compositional biasi161 – 1677Poly-Glu
Compositional biasi185 – 24056Lys-richAdd
BLAST

Sequence similaritiesi

Contains 1 CCHC-type zinc finger.PROSITE-ProRule annotation
Contains 1 S1 motif domain.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri131 – 14818CCHC-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiCOG1185.
GeneTreeiENSGT00510000047363.
HOGENOMiHOG000113809.
HOVERGENiHBG080343.
InParanoidiQ9NP64.
OrthoDBiEOG7NCV4Q.
PhylomeDBiQ9NP64.
TreeFamiTF332136.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR022967. S1_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
SM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q9NP64-1) [UniParc]FASTAAdd to basket

Also known as: hpNO40

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MNSGRPETME NLPALYTIFQ GEVAMVTDYG AFIKIPGCRK QGLVHRTHMS
60 70 80 90 100
SCRVDKPSEI VDVGDKVWVK LIGREMKNDR IKVSLSMKVV NQGTGKDLDP
110 120 130 140 150
NNVIIEQEER RRRSFQDYTG QKITLEAVLN TTCKKCGCKG HFAKDCFMQP
160 170 180 190 200
GGTKYSLIPD EEEEKEEAKS AEFEKPDPTR NPSRKRKKEK KKKKHRDRKS
210 220 230 240
SDSDSSDSES DTGKRARHTS KDSKAAKKKK KKKKHKKKHK E
Length:241
Mass (Da):27,570
Last modified:October 1, 2000 - v1
Checksum:iDA1B039DAC5F4A1D
GO
Isoform 2 (identifier: Q9NP64-2) [UniParc]FASTAAdd to basket

Also known as: hpNO40s

The sequence of this isoform differs from the canonical sequence as follows:
     1-24: Missing.

Show »
Length:217
Mass (Da):24,919
Checksum:i9082B1330EE4DAAF
GO
Isoform 3 (identifier: Q9NP64-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-22: MNSGRPETMENLPALYTIFQGE → MKQLIEDTEKNKVY

Note: No experimental confirmation available.

Show »
Length:233
Mass (Da):26,810
Checksum:iB474CB5DC1AF7600
GO

Sequence cautioni

The sequence AAF36171.1 differs from that shown. Reason: Frameshift at position 48. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti217 – 2171R → G in AAF36171 (PubMed:11042152).Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 2424Missing in isoform 2. 1 PublicationVSP_015308Add
BLAST
Alternative sequencei1 – 2222MNSGR…IFQGE → MKQLIEDTEKNKVY in isoform 3. 1 PublicationVSP_054531Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF247661 mRNA. Translation: AAF72518.3.
AF151077 mRNA. Translation: AAF36163.1.
AF151085 mRNA. Translation: AAF36171.1. Frameshift.
AK001929 mRNA. Translation: BAA91984.1.
AK022506 mRNA. Translation: BAB14066.1.
AK024049 mRNA. Translation: BAB14799.1.
AK302248 mRNA. Translation: BAG63600.1.
AL451070 Genomic DNA. Translation: CAH71849.1.
CH471059 Genomic DNA. Translation: EAX07620.1.
CH471059 Genomic DNA. Translation: EAX07621.1.
CH471059 Genomic DNA. Translation: EAX07622.1.
CH471059 Genomic DNA. Translation: EAX07624.1.
BC000685 mRNA. Translation: AAH00685.1.
BC007446 mRNA. Translation: AAH07446.1.
BC050609 mRNA. Translation: AAH50609.1.
CCDSiCCDS341.1. [Q9NP64-1]
CCDS60061.1. [Q9NP64-3]
RefSeqiNP_001269495.1. NM_001282566.1.
NP_001269496.1. NM_001282567.1.
NP_001269497.1. NM_001282568.1. [Q9NP64-1]
NP_001269498.1. NM_001282569.1. [Q9NP64-3]
NP_001269499.1. NM_001282570.1. [Q9NP64-2]
NP_001269500.1. NM_001282571.1.
NP_001269501.1. NM_001282572.1.
NP_001269502.1. NM_001282573.1.
NP_001269503.1. NM_001282574.1.
NP_057589.2. NM_016505.3. [Q9NP64-1]
XP_006710744.1. XM_006710681.2. [Q9NP64-3]
UniGeneiHs.524094.

Genome annotation databases

EnsembliENST00000344147; ENSP00000343557; ENSG00000121766. [Q9NP64-1]
ENST00000373714; ENSP00000362819; ENSG00000121766. [Q9NP64-1]
ENST00000546109; ENSP00000444742; ENSG00000121766. [Q9NP64-3]
GeneIDi51538.
KEGGihsa:51538.
UCSCiuc001bsp.1. human. [Q9NP64-1]
uc001bsq.1. human.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF247661 mRNA. Translation: AAF72518.3.
AF151077 mRNA. Translation: AAF36163.1.
AF151085 mRNA. Translation: AAF36171.1. Frameshift.
AK001929 mRNA. Translation: BAA91984.1.
AK022506 mRNA. Translation: BAB14066.1.
AK024049 mRNA. Translation: BAB14799.1.
AK302248 mRNA. Translation: BAG63600.1.
AL451070 Genomic DNA. Translation: CAH71849.1.
CH471059 Genomic DNA. Translation: EAX07620.1.
CH471059 Genomic DNA. Translation: EAX07621.1.
CH471059 Genomic DNA. Translation: EAX07622.1.
CH471059 Genomic DNA. Translation: EAX07624.1.
BC000685 mRNA. Translation: AAH00685.1.
BC007446 mRNA. Translation: AAH07446.1.
BC050609 mRNA. Translation: AAH50609.1.
CCDSiCCDS341.1. [Q9NP64-1]
CCDS60061.1. [Q9NP64-3]
RefSeqiNP_001269495.1. NM_001282566.1.
NP_001269496.1. NM_001282567.1.
NP_001269497.1. NM_001282568.1. [Q9NP64-1]
NP_001269498.1. NM_001282569.1. [Q9NP64-3]
NP_001269499.1. NM_001282570.1. [Q9NP64-2]
NP_001269500.1. NM_001282571.1.
NP_001269501.1. NM_001282572.1.
NP_001269502.1. NM_001282573.1.
NP_001269503.1. NM_001282574.1.
NP_057589.2. NM_016505.3. [Q9NP64-1]
XP_006710744.1. XM_006710681.2. [Q9NP64-3]
UniGeneiHs.524094.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2CQONMR-A1-106[»]
SMRiQ9NP64. Positions 5-106.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi119598. 14 interactions.
IntActiQ9NP64. 8 interactions.
MINTiMINT-1447770.
STRINGi9606.ENSP00000343557.

PTM databases

PhosphoSiteiQ9NP64.

Polymorphism and mutation databases

DMDMi73921227.

Proteomic databases

MaxQBiQ9NP64.
PaxDbiQ9NP64.
PRIDEiQ9NP64.

Protocols and materials databases

DNASUi51538.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000344147; ENSP00000343557; ENSG00000121766. [Q9NP64-1]
ENST00000373714; ENSP00000362819; ENSG00000121766. [Q9NP64-1]
ENST00000546109; ENSP00000444742; ENSG00000121766. [Q9NP64-3]
GeneIDi51538.
KEGGihsa:51538.
UCSCiuc001bsp.1. human. [Q9NP64-1]
uc001bsq.1. human.

Organism-specific databases

CTDi51538.
GeneCardsiGC01P031769.
HGNCiHGNC:30246. ZCCHC17.
HPAiHPA028280.
HPA053727.
neXtProtiNX_Q9NP64.
PharmGKBiPA142670539.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiCOG1185.
GeneTreeiENSGT00510000047363.
HOGENOMiHOG000113809.
HOVERGENiHBG080343.
InParanoidiQ9NP64.
OrthoDBiEOG7NCV4Q.
PhylomeDBiQ9NP64.
TreeFamiTF332136.

Miscellaneous databases

ChiTaRSiZCCHC17. human.
EvolutionaryTraceiQ9NP64.
GeneWikiiZCCHC17.
GenomeRNAii51538.
NextBioi35476128.
PROiQ9NP64.

Gene expression databases

BgeeiQ9NP64.
CleanExiHS_ZCCHC17.
GenevestigatoriQ9NP64.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR022967. S1_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
SMARTiSM00316. S1. 1 hit.
SM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular characterization of a novel nucleolar protein, pNO40."
    Chang W.-L., Lee D.-C., Leu S., Huang Y.-M., Lu M.-C., Ouyang P.
    Biochem. Biophys. Res. Commun. 307:569-577(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), ALTERNATIVE SPLICING, SUBCELLULAR LOCATION, INTERACTION WITH PNN.
    Tissue: Kidney.
  2. "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells."
    Zhang Q.-H., Ye M., Wu X.-Y., Ren S.-X., Zhao M., Zhao C.-J., Fu G., Shen Y., Fan H.-Y., Lu G., Zhong M., Xu X.-R., Han Z.-G., Zhang J.-W., Tao J., Huang Q.-H., Zhou J., Hu G.-X.
    , Gu J., Chen S.-J., Chen Z.
    Genome Res. 10:1546-1560(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Umbilical cord blood.
  3. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3).
    Tissue: Placenta, Retinoblastoma, Teratocarcinoma and Testis.
  4. "The DNA sequence and biological annotation of human chromosome 1."
    Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.
    , Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.
    Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  6. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Kidney, Muscle and Uterus.
  7. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-114, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  8. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-114, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  9. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
    Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
    Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-114, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  10. "Solution structure of the S1 RNA binding domain of human hypothetical protein FLJ11067."
    RIKEN structural genomics initiative (RSGI)
    Submitted (NOV-2005) to the PDB data bank
    Cited for: STRUCTURE BY NMR OF 1-106.

Entry informationi

Entry nameiNO40_HUMAN
AccessioniPrimary (citable) accession number: Q9NP64
Secondary accession number(s): B4DY38
, D3DPN4, Q6PKH4, Q9NYG4, Q9P0M8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: October 1, 2000
Last modified: April 29, 2015
This is version 124 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.