Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q9N580 (Q9N580_CAEEL)

Last modified May 5, 2009. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL AAF60446.1
Gene names
ORF Names: Y17G9B.5 EMBL AAF60446.1
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length350 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

atn-1Q231581EBI-330068,EBI-314014
nhr-6P418291EBI-330068,EBI-314469

Sequences

Sequence LengthMass (Da)Tools
Q9N580-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: EACEA78410BCB900

FASTA35040,636
        10         20         30         40         50         60 
MALAHVSRRV ISNQIRCFAA ANQETSLVHV EKQFEAIEPE KRDKDAFMAA IATFKEKRGR 

        70         80         90        100        110        120 
THVEFINTAL KYVKEYGVHK DIDTYKGLLE VFPKGKMIPQ TVFQKVFLHY PQQQNCAVKV 

       130        140        150        160        170        180 
LDEMEWHGVQ PDKEIHDIVV NAFGEWNFAT KKVKRMLYWM PKLKHSNKYL DRRHVEGKSL 

       190        200        210        220        230        240 
SPSELAGIAL KMMSRDAASS ISLLKLSDSS DPQQKWLATS QSPMQQILIS ELRKGDEVFV 

       250        260        270        280        290        300 
DAAKVYLQDR VIPFITLTGN TKLEPLNEFK NEDMDEDYTN WYADWQKQRG EAKRSIHEQD 

       310        320        330        340        350 
HETIFAMGAM YKDDNATAIR WIDNLQKTNP NMENLRFRVR LEGNPIISRK 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

AC006720 Genomic DNA. Translation: AAF60446.1.
RefSeqNP_500631.1.
UniGeneCel.23398

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:27313N.
IntActQ9N580. 6 interactions.

Genome annotation databases

EnsemblY17G9B.5. Caenorhabditis elegans. [Contig view]
GeneID177244.
KEGGcel:Y17G9B.5.
NMPDRfig|6239.3.peg.13209.

Organism-specific databases

WormBaseWBGene00021202. Y17G9B.5.
WormPepY17G9B.5. CE24184. [WorfDB]

Phylogenomic databases

OMAQ9N580. EGPFPLW.

Gene expression databases

ArrayExpressQ9N580.

Family and domain databases

InterProIPR010418. ECSIT.
IPR018039. Intermediate_filament_CS.
[Graphical view]
PANTHERPTHR13113. ECSIT. 1 hit.
PfamPF06239. ECSIT. 1 hit.
[Graphical view]
PROSITEPS00226. IF. 1 hit. Uncertain.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio895958.

Entry information

Entry nameQ9N580_CAEEL
AccessionPrimary (citable) accession number: Q9N580
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: May 5, 2009
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information