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Protein

Galectin

Gene

lec-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei73GalactoseCombined sources1

GO - Molecular functioni

Keywordsi

LigandLectinUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
GalectinUniRule annotation
Gene namesi
Name:lec-6Imported
ORF Names:CELE_Y55B1AR.1Imported, Y55B1AR.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiY55B1AR.1; CE22493; WBGene00002269; lec-6.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: WormBase

PTM / Processingi

Proteomic databases

EPDiQ9N384.
PaxDbiQ9N384.
PeptideAtlasiQ9N384.

Expressioni

Gene expression databases

BgeeiWBGene00002269.
ExpressionAtlasiQ9N384. baseline and differential.

Interactioni

Protein-protein interaction databases

IntActiQ9N384. 1 interactor.
STRINGi6239.Y55B1AR.1.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3VV1X-ray1.50A/B1-146[»]
ProteinModelPortaliQ9N384.
SMRiQ9N384.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 145GalectinInterPro annotationAdd BLAST126

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni60 – 64Galactose bindingCombined sources5
Regioni64 – 67Fucose bindingCombined sources4
Regioni80 – 83Galactose bindingCombined sources4
Regioni82 – 85Fucose bindingCombined sources4

Phylogenomic databases

eggNOGiKOG3587. Eukaryota.
ENOG4111EA0. LUCA.
InParanoidiQ9N384.
OMAiHSAHVSH.
OrthoDBiEOG091G0WP8.
PhylomeDBiQ9N384.

Family and domain databases

InterProiView protein in InterPro
IPR013320. ConA-like_dom.
IPR001079. Galectin_CRD.
PfamiView protein in Pfam
PF00337. Gal-bind_lectin. 1 hit.
SMARTiView protein in SMART
SM00908. Gal-bind_lectin. 1 hit.
SM00276. GLECT. 1 hit.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiView protein in PROSITE
PS51304. GALECTIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9N384-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIGGGIGISF RNEFFNPQTP VNIPVQGFSN GARLRLVLLP TSADSRFHIN
60 70 80 90 100
LRTPDDIVLH FNARFDEGAV VNNSTSGGGW QSEDRHANPF QQNKIYTLEF
110 120 130 140
VSNGGIISIF VNGAHFADFV ERTPSHGVHL IEIEGGVHVH SAHVSH
Length:146
Mass (Da):15,983
Last modified:October 1, 2000 - v1
Checksum:i1D955F3B7CC8A0DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CCD73852.1.
RefSeqiNP_497215.1. NM_064814.6.
UniGeneiCel.19694.

Genome annotation databases

EnsemblMetazoaiY55B1AR.1.1; Y55B1AR.1.1; WBGene00002269.
Y55B1AR.1.2; Y55B1AR.1.2; WBGene00002269.
GeneIDi175212.
KEGGicel:CELE_Y55B1AR.1.
UCSCiY55B1AR.1.1. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9N384_CAEEL
AccessioniPrimary (citable) accession number: Q9N384
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: July 5, 2017
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported