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Q9N1X3 (Q9N1X3_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:SFTPA EMBL AAF28384.1
OrganismSus scrofa (Pig) EMBL AAF28384.1
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length116 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Molecular_functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAF28384.1

Sequences

Sequence LengthMass (Da)Tools
Q9N1X3 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 6601D39320760C74

FASTA11612,946
        10         20         30         40         50         60 
AVGEKVFSTN GQSVAFDVIR ELCARAGGRI AAPRSPEENE AIASIVKKHN TYAYLGLVEG 

        70         80         90        100        110 
PTAGDFFYLD GTPVNYTNWY PGEPRGRGKE KCVEMYTDGQ WNDRNCQQYR LAICEF 

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References

[1]"Porcine lung surfactant protein D: complementary DNA cloning, chromosomal localization, and tissue distribution."
van Eijk M., Haagsman H.P., Skinner T., Archibald A.L., Reid K.B.M., Lawson P.R.
J. Immunol. 164:1442-1450(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF133668 Genomic DNA. Translation: AAF28384.1.
UniGeneSsc.16255.

3D structure databases

ProteinModelPortalQ9N1X3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9823.ENSSSCP00000011022.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG108270.

Family and domain databases

Gene3D3.10.100.10. 1 hit.
InterProIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamPF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMSSF56436. SSF56436. 1 hit.
PROSITEPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9N1X3_PIG
AccessionPrimary (citable) accession number: Q9N1X3
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: July 9, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)