Q9MC90 (Q9MC90_BPD3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Name:

orf31 EMBL AAF80791.1

Organism

Pseudomonas phage D3 (Bacteriophage D3) [Complete proteome] EMBL AAF80791.1

Taxonomic identifier

31535 [NCBI]

Taxonomic lineage

Viruses › dsDNA viruses, no RNA stage › Caudovirales › Siphoviridae › unclassified Siphoviridae

Virus host

Pseudomonas aeruginosa [TaxID: 287]

Protein attributes

Sequence length	160 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9MC90 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 1FCD399B93DFD86C	FASTA	160	17,313
	10 20 30 40 50 60 MAVVSEKTAG GRNVLAFLDM LAWSEGTSTI RGSDNGYNVV VGGGLFNGYA DHPRLKVYLP 70 80 90 100 110 120 RYKVYSTAAG RYQLLSRYWD AYRESLALKG GFTPANQDLV ALQQIKERRA LADIQAGRLA 130 140 150 160 DAVQKCSNIW ASLPGAGYGQ REHSLDDLAA HYLAAGGVLS

References

[1]

"Cloning of the early promoters of Pseudomonas aeruginosa bacteriophage D3: sequence of the immunity region of D3." Farinha M.A., Allan B.J., Gertman E.M., Ronald S.L., Kropinski A.M. J. Bacteriol. 176:4809-4815(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF165214 Genomic DNA. Translation: AAF80791.1.
RefSeq	NP_061527.1. NC_002484.1.
3D structure databases
HSSP	HSSP built from PDB template 1D9U based on UniProtKB P03706.
ProteinModelPortal	Q9MC90.
SMR	Q9MC90. Positions 16-159.
ModBase	Search...
Protein family/group databases
CAZy	GH104. Glycoside Hydrolase Family 104.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1262894.
Phylogenomic databases
ProtClustDB	CLSP2343790.
Family and domain databases
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. [Graphical view]
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9MC90_BPD3

Accession

Primary (citable) accession number: Q9MC90

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)