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Q9MAQ3

- UBP11_ARATH

UniProt

Q9MAQ3 - UBP11_ARATH

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Protein

Putative ubiquitin carboxyl-terminal hydrolase 11

Gene
UBP11, At1g32850, F9L11.5
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins By similarity.

Catalytic activityi

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei310 – 3101Nucleophile By similarity
Active sitei838 – 8381Proton acceptor By similarity

GO - Molecular functioni

  1. ubiquitin-specific protease activity Source: InterPro

GO - Biological processi

  1. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Thiol protease

Keywords - Biological processi

Ubl conjugation pathway

Enzyme and pathway databases

BioCyciARA:AT1G32850-MONOMER.

Protein family/group databases

MEROPSiC19.A04.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ubiquitin carboxyl-terminal hydrolase 11 (EC:3.4.19.12)
Alternative name(s):
Deubiquitinating enzyme 11
Short name:
AtUBP11
Ubiquitin thioesterase 11
Ubiquitin-specific-processing protease 11
Gene namesi
Name:UBP11
Ordered Locus Names:At1g32850
ORF Names:F9L11.5
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G32850.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 892892Putative ubiquitin carboxyl-terminal hydrolase 11PRO_0000313038Add
BLAST

Proteomic databases

PRIDEiQ9MAQ3.

Expressioni

Gene expression databases

GenevestigatoriQ9MAQ3.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G32850.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9MAQ3.
SMRiQ9MAQ3. Positions 27-225, 299-480, 626-885.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 132116DUSPAdd
BLAST
Domaini301 – 880580USPAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase C19 family.
Contains 1 DUSP domain.
Contains 1 USP domain.

Phylogenomic databases

eggNOGiCOG5560.
HOGENOMiHOG000264375.
InParanoidiQ9MAQ3.
KOiK11835.
OMAiRDTETED.
PhylomeDBiQ9MAQ3.

Family and domain databases

Gene3Di3.30.2230.10. 1 hit.
InterProiIPR006615. Pept_C19_DUSP.
IPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view]
PfamiPF06337. DUSP. 1 hit.
PF00443. UCH. 1 hit.
[Graphical view]
SMARTiSM00695. DUSP. 1 hit.
[Graphical view]
SUPFAMiSSF143791. SSF143791. 1 hit.
PROSITEiPS51283. DUSP. 1 hit.
PS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9MAQ3-1 [UniParc]FASTAAdd to Basket

« Hide

MTLITDSESI GVCESSYTPE EERRIVTELN NEAEADLKEG NLYFVISNRW    50
YTRWQRFVGL LTEEFRSGEP SEVTRPGPID NHDIIDSESD ASDPQLRMML 100
EEGVDYTLVQ QEVWRKLVKW YKGGPPVPRK LISQGFYTKS FSVEVYLLCL 150
TLTDSRDEST TIIRLSKQAS IGQLYEMVCA GKGVAKEKAR IWDYFEKKKS 200
VLLDPSSEQS VEEAGLQFNQ DILLEVDGSA SSQFVMSLAE NELAMVPLEP 250
MRSDAMDIVR GGGTLSNGHS NGFKFSFFGR NTFKDDVSSR TFGKGEKRGL 300
GGLQNLGNTC FMNSTLQCLA HTPPIVEYFL QDYRSDINAK NPLGMRGELA 350
IAFGELLRKL WSSGQNTVAP RAFKTKLARF APQFSGYNQH DSQEMLAFLL 400
DGLHEDLNKV KRKPYIEAKD SDGRPDDEVA EEKWKYHKAR NDSVIVDVFQ 450
GQYKSTLVCP DCGKISITFD PFMYLSLPLP SSRTRSMTVT VFYGDGSHLP 500
MPYTVTVPKD GSCRDLSNAL GTACCLDNDE SLLLAEVYDH KVFKYYENPR 550
ELLNGIKDNE HIVAYRFKQM HKGPGKVKLE ILHGEQEKSS DRGPKCFGTP 600
LVTYINKEPL SGTDIATSIS GLLSPLRRVH MSCVVNSGNE NGHVPDESSR 650
SILSRDTETE DNDRELSLSL LRDYYSFNLQ PLESDSVVNP GSVTKVLVKW 700
NEKEHEKYDS SYLNDLPKVH KNVLAKKTMQ EGISLFSCLE AFLAEEPLGP 750
DDMWYCPGCK EHRQANKKLD LWKLPDILVF HLKRFTYSRY FKNKIDTLVN 800
FHIHDLDLSK YVKNEDGQSY LYELYAISNH YGGLGGGHYT AYAKLMDETK 850
WYNFDDSRVS AVNESEIKTS AAYVLFYQRV KSDSETSDMK MD 892
Length:892
Mass (Da):101,175
Last modified:January 15, 2008 - v2
Checksum:i8377D6A44BD26A67
GO

Sequence cautioni

The sequence AAF31287.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006424 Genomic DNA. Translation: AAF31287.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE31532.1.
PIRiC86453.
RefSeqiNP_174562.2. NM_103019.2.
UniGeneiAt.51891.

Genome annotation databases

EnsemblPlantsiAT1G32850.1; AT1G32850.1; AT1G32850.
GeneIDi840179.
KEGGiath:AT1G32850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006424 Genomic DNA. Translation: AAF31287.1 . Sequence problems.
CP002684 Genomic DNA. Translation: AEE31532.1 .
PIRi C86453.
RefSeqi NP_174562.2. NM_103019.2.
UniGenei At.51891.

3D structure databases

ProteinModelPortali Q9MAQ3.
SMRi Q9MAQ3. Positions 27-225, 299-480, 626-885.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G32850.1-P.

Protein family/group databases

MEROPSi C19.A04.

Proteomic databases

PRIDEi Q9MAQ3.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G32850.1 ; AT1G32850.1 ; AT1G32850 .
GeneIDi 840179.
KEGGi ath:AT1G32850.

Organism-specific databases

TAIRi AT1G32850.

Phylogenomic databases

eggNOGi COG5560.
HOGENOMi HOG000264375.
InParanoidi Q9MAQ3.
KOi K11835.
OMAi RDTETED.
PhylomeDBi Q9MAQ3.

Enzyme and pathway databases

BioCyci ARA:AT1G32850-MONOMER.

Gene expression databases

Genevestigatori Q9MAQ3.

Family and domain databases

Gene3Di 3.30.2230.10. 1 hit.
InterProi IPR006615. Pept_C19_DUSP.
IPR018200. Pept_C19ubi-hydrolase_C_CS.
IPR001394. Peptidase_C19_UCH.
IPR028889. UCH/PAN2.
[Graphical view ]
Pfami PF06337. DUSP. 1 hit.
PF00443. UCH. 1 hit.
[Graphical view ]
SMARTi SM00695. DUSP. 1 hit.
[Graphical view ]
SUPFAMi SSF143791. SSF143791. 1 hit.
PROSITEi PS51283. DUSP. 1 hit.
PS00972. USP_1. 1 hit.
PS00973. USP_2. 1 hit.
PS50235. USP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "The ubiquitin-specific protease family from Arabidopsis. AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine."
    Yan N., Doelling J.H., Falbel T.G., Durski A.M., Vierstra R.D.
    Plant Physiol. 124:1828-1843(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.

Entry informationi

Entry nameiUBP11_ARATH
AccessioniPrimary (citable) accession number: Q9MAQ3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 15, 2008
Last modified: June 11, 2014
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi