Q9MAG3 (AB24G_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
ABC transporter G family member 24
Short name=ABC transporter ABCG.24
Short name=AtABCG24

Alternative name(s):
Probable white-brown complex homolog protein 25
Short name=AtWBC25

Gene names

Name:	ABCG24
Synonyms:	WBC25
Ordered Locus Names:	At1g53390
ORF Names:	F12M16.28

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	1109 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity.
Sequence similarities	Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily. [View classification] Contains 1 ABC transmembrane type-2 domain. Contains 1 ABC transporter domain.
Sequence caution	The sequence BAE99398.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Biological process	Transport
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix
Ligand	ATP-binding Nucleotide-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from direct assay. Source: TAIR
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 1109	1109	ABC transporter G family member 24		PRO_0000240696
Regions
	Transmembrane	877 – 897	21	Helical; Potential
	Transmembrane	904 – 924	21	Helical; Potential
	Transmembrane	954 – 974	21	Helical; Potential
	Transmembrane	986 – 1006	21	Helical; Potential
	Transmembrane	1007 – 1027	21	Helical; Potential
	Transmembrane	1085 – 1105	21	Helical; Potential
	Domain	507 – 749	243	ABC transporter
	Domain	859 – 1059	201	ABC transmembrane type-2
	Nucleotide binding	541 – 548	8	ATP Potential

Sequences

	Sequence		Length	Mass (Da)
	Q9MAG3 [UniParc]. Last modified February 8, 2011. Version 2. Checksum: 08E15D0274B568E0	FASTA	1,109	122,877
	10 20 30 40 50 60 MNFNTSLVIM LLNLKMSVDR RNWLKHGCNL RLVILVLWLV CYVSNGQTIG DTSDFNNPAV 70 80 90 100 110 120 LPLVTQMVYR SLSNSTAALN RELGIRAKFC VKDPDADWNR AFNFSSNLNF LSSCIKKTQG 130 140 150 160 170 180 SIGKRICTAA EMKFYFNGFF NKTNNPGYLK PNVNCNLTSW VSGCEPGWGC SVDPTEQVDL 190 200 210 220 230 240 QNSKDFPERR RNCMPCCEGF FCPRGLTCMI PCPLGAHCPL ATLNKTTSLC EPYTYQLPSG 250 260 270 280 290 300 RPNHTCGGAN VWADIRSSGE VFCSAGSYCP TTTQKVPCDS GHYCRMGSTS EKPCFKLTSC 310 320 330 340 350 360 NPNTANQNMH AFGIMVIAAV STILLIIYNC SDQILTTRER RQAKSREAAV KKARAHHRWK 370 380 390 400 410 420 AAREAAKKHV SGIRAQITRT FSGKRANQDG DTNKMLGRGD SSEIDEAIDM STCSSPASSS 430 440 450 460 470 480 AAQSSYENED HAAAGSNGRA SLGIEGKRVK GQTLAKIKKT QSQIFKYAYD RIEKEKAMEQ 490 500 510 520 530 540 ENKNLTFSGI VKMATNSETR KRHLMELSFK DLTLTLKSNG KQVLRCVTGS MKPGRITAVM 550 560 570 580 590 600 GPSGAGKTSL LSALAGKAVG CKLSGLILIN GKQESIHSYK KIIGFVPQDD VVHGNLTVEE 610 620 630 640 650 660 NLWFHAKCRL PADLSKADKV LVVERIIDSL GLQAVRSSLV GTVEKRGISG GQRKRVNVGL 670 680 690 700 710 720 EMVMEPSVLF LDEPTSGLDS ASSQLLLRAL RHEALEGVNI CMVVHQPSYT LFKTFNDLVL 730 740 750 760 770 780 LAKGGLTVYH GSVNKVEEYF SGLGIHVPDR INPPDYYIDV LEGVVISMGN SGIGYKELPQ 790 800 810 820 830 840 RWMLHKGYSV PLDMRNNSAA GLETNPDLGT NSPDNAEQTF ARELWRDVKS NFRLRRDKIR 850 860 870 880 890 900 HNFLKSRDLS HRRTPSTWLQ YKYFLGRIAK QRMREAQLQA TDYLILLLAG ACLGSLIKAS 910 920 930 940 950 960 DESFGAPGYI YTIIAVSLLC KIAALRSFSL DKLHYWRESA SGMSSSACFL AKDTIDIFNI 970 980 990 1000 1010 1020 LVKPLVYLSM FYFFTNPRST FFDNYIVLVC LVYCVTGIAY ALAIFLQPST AQLFSVLLPV 1030 1040 1050 1060 1070 1080 VLTLVATQPK NSELIRIIAD LSYPKWALEA FVIGNAQKYY GVWMITRCGS LMKSGYDINK 1090 1100 WSLCIMILLL VGLTTRGVAF VGMLILQKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"The Arabidopsis thaliana ABC protein superfamily, a complete inventory." Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A. J. Biol. Chem. 276:30231-30244(2001) [PubMed: 11346655] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
[5]	"A proteomic study of the Arabidopsis nuclear matrix." Calikowski T.T., Meulia T., Meier I. J. Cell. Biochem. 90:361-378(2003) [PubMed: 14505352] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[6]	"Plant ABC proteins - a unified nomenclature and updated inventory." Verrier P.J., Bird D., Burla B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu H.U., Lee Y., Martinoia E., Murphy A., Rea P.A., Samuels L., Schulz B., Spalding E.J., Yazaki K., Theodoulou F.L. Trends Plant Sci. 13:151-159(2008) [PubMed: 18299247] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC008007 Genomic DNA. Translation: AAF69540.1. CP002684 Genomic DNA. Translation: AEE32936.1. AK227394 mRNA. Translation: BAE99398.1. Different initiation.
IPI	IPI00532787.
RefSeq	NP_175745.4. NM_104218.4.
UniGene	At.37411.
3D structure databases
ProteinModelPortal	Q9MAG3.
SMR	Q9MAG3. Positions 464-738.
ModBase	Search...
Proteomic databases
PRIDE	Q9MAG3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G53390.1; AT1G53390.1; AT1G53390.
GeneID	841775.
GenomeReviews	Gene locus AT1G53390 in contig CT485782_GR.
KEGG	ath:AT1G53390.
Organism-specific databases
TAIR	At1g53390.
Phylogenomic databases
HOGENOM	HBG317191.
InParanoid	Q9MAG3.
PhylomeDB	Q9MAG3.
Gene expression databases
Genevestigator	Q9MAG3.
GermOnline	AT1G53390. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR003593. ATPase_AAA+_core. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
PROSITE	PS51012. ABC_TM2. False negative. PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

AB24G_ARATH

Accession

Primary (citable) accession number: Q9MAG3
Secondary accession number(s): Q0WU00

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 27, 2006
Last sequence update:	February 8, 2011
Last modified:	December 14, 2011
This is version 77 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program