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Q9M9P3

- UGPA2_ARATH

UniProt

Q9M9P3 - UGPA2_ARATH

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Protein
Probable UTP--glucose-1-phosphate uridylyltransferase 2
Gene
At3g03250, T17B22.6
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Plays a central role as a glucosyl donor in cellular metabolic pathways By similarity.

Catalytic activityi

UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose.

GO - Molecular functioni

  1. UTP:glucose-1-phosphate uridylyltransferase activity Source: UniProtKB-EC

GO - Biological processi

  1. callose deposition in cell wall Source: TAIR
  2. cellular response to phosphate starvation Source: TAIR
  3. pollen development Source: TAIR
  4. response to salt stress Source: TAIR
  5. sucrose metabolic process Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Nucleotidyltransferase, Transferase

Enzyme and pathway databases

BioCyciARA:AT3G03250-MONOMER.
MetaCyc:AT3G03250-MONOMER.
ReactomeiREACT_180021. Glycogen synthesis.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable UTP--glucose-1-phosphate uridylyltransferase 2 (EC:2.7.7.9)
Alternative name(s):
UDP-glucose pyrophosphorylase 2
Short name:
UDPGP 2
Short name:
UGPase 2
Gene namesi
Ordered Locus Names:At3g03250
ORF Names:T17B22.6
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G03250.

Subcellular locationi

Cytoplasm By similarity

GO - Cellular componenti

  1. cytosol Source: TAIR
  2. plasma membrane Source: TAIR
  3. pollen tube Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 469468Probable UTP--glucose-1-phosphate uridylyltransferase 2
PRO_0000185757Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9M9P3.
PRIDEiQ9M9P3.

Expressioni

Gene expression databases

GenevestigatoriQ9M9P3.

Interactioni

Protein-protein interaction databases

BioGridi6646. 1 interaction.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi8 – 1710
Beta strandi19 – 213
Helixi23 – 3614
Helixi46 – 483
Turni54 – 563
Beta strandi57 – 593
Helixi60 – 623
Helixi70 – 778
Beta strandi80 – 867
Helixi91 – 933
Beta strandi96 – 983
Helixi99 – 1013
Beta strandi102 – 1054
Helixi110 – 12516
Beta strandi131 – 1355
Turni137 – 1393
Helixi140 – 1478
Helixi148 – 1503
Beta strandi153 – 1553
Beta strandi157 – 1615
Turni170 – 1734
Helixi176 – 1794
Helixi184 – 1863
Helixi192 – 1943
Helixi195 – 2028
Helixi204 – 2096
Beta strandi215 – 2206
Helixi230 – 23910
Beta strandi242 – 2498
Helixi252 – 2543
Beta strandi259 – 2635
Beta strandi266 – 2705
Helixi272 – 2743
Helixi277 – 2793
Helixi280 – 2845
Beta strandi285 – 2884
Beta strandi291 – 30010
Helixi301 – 3099
Beta strandi321 – 3244
Beta strandi327 – 3304
Helixi336 – 3427
Beta strandi347 – 3504
Helixi353 – 3553
Helixi362 – 3698
Beta strandi373 – 3764
Beta strandi379 – 3824
Beta strandi388 – 3903
Beta strandi393 – 3964
Helixi398 – 4003
Helixi403 – 4086
Beta strandi410 – 4123
Beta strandi419 – 43012
Beta strandi435 – 4439
Beta strandi449 – 4524
Beta strandi457 – 4604
Helixi466 – 4683

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1Z90X-ray1.86A/B1-469[»]
2ICXX-ray1.85A/B2-469[»]
2ICYX-ray1.64A/B2-469[»]
2Q4JX-ray1.86A/B1-469[»]
ProteinModelPortaliQ9M9P3.
SMRiQ9M9P3. Positions 7-469.

Miscellaneous databases

EvolutionaryTraceiQ9M9P3.

Family & Domainsi

Sequence similaritiesi

Belongs to the UDPGP type 1 family.

Phylogenomic databases

eggNOGiCOG4284.
HOGENOMiHOG000113618.
InParanoidiQ9M9P3.
KOiK00963.
OMAiAIDVFSH.
PhylomeDBiQ9M9P3.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR029044. Nucleotide-diphossugar_trans.
IPR016267. UDPGP_trans.
IPR002618. UDPGP_trans_fam.
[Graphical view]
PANTHERiPTHR11952. PTHR11952. 1 hit.
PTHR11952:SF1. PTHR11952:SF1. 1 hit.
PfamiPF01704. UDPGP. 1 hit.
[Graphical view]
PIRSFiPIRSF000806. UDPGP. 1 hit.
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9M9P3-1 [UniParc]FASTAAdd to Basket

« Hide

MAATTENLPQ LKSAVDGLTE MSESEKSGFI SLVSRYLSGE AQHIEWSKIQ    50
TPTDEIVVPY EKMTPVSQDV AETKNLLDKL VVLKLNGGLG TTMGCTGPKS 100
VIEVRDGLTF LDLIVIQIEN LNNKYGCKVP LVLMNSFNTH DDTHKIVEKY 150
TNSNVDIHTF NQSKYPRVVA DEFVPWPSKG KTDKEGWYPP GHGDVFPALM 200
NSGKLDTFLS QGKEYVFVAN SDNLGAIVDL TILKHLIQNK NEYCMEVTPK 250
TLADVKGGTL ISYEGKVQLL EIAQVPDEHV NEFKSIEKFK IFNTNNLWVN 300
LKAIKKLVEA DALKMEIIPN PKEVDGVKVL QLETAAGAAI RFFDNAIGVN 350
VPRSRFLPVK ASSDLLLVQS DLYTLVDGFV TRNKARTNPS NPSIELGPEF 400
KKVATFLSRF KSIPSIVELD SLKVSGDVWF GSSIVLKGKV TVAAKSGVKL 450
EIPDRAVVEN KNINGPEDL 469
Length:469
Mass (Da):51,738
Last modified:October 1, 2000 - v1
Checksum:iD0B70B92A2372820
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti187 – 1871W → R in AAK32773. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC012328 Genomic DNA. Translation: AAF26102.1.
CP002686 Genomic DNA. Translation: AEE73917.1.
AY035071 mRNA. Translation: AAK59576.1.
AY059148 mRNA. Translation: AAL15254.1.
AF361605 mRNA. Translation: AAK32773.1.
RefSeqiNP_186975.1. NM_111195.3.
UniGeneiAt.24250.

Genome annotation databases

EnsemblPlantsiAT3G03250.1; AT3G03250.1; AT3G03250.
GeneIDi821313.
KEGGiath:AT3G03250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC012328 Genomic DNA. Translation: AAF26102.1 .
CP002686 Genomic DNA. Translation: AEE73917.1 .
AY035071 mRNA. Translation: AAK59576.1 .
AY059148 mRNA. Translation: AAL15254.1 .
AF361605 mRNA. Translation: AAK32773.1 .
RefSeqi NP_186975.1. NM_111195.3.
UniGenei At.24250.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1Z90 X-ray 1.86 A/B 1-469 [» ]
2ICX X-ray 1.85 A/B 2-469 [» ]
2ICY X-ray 1.64 A/B 2-469 [» ]
2Q4J X-ray 1.86 A/B 1-469 [» ]
ProteinModelPortali Q9M9P3.
SMRi Q9M9P3. Positions 7-469.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 6646. 1 interaction.

Proteomic databases

PaxDbi Q9M9P3.
PRIDEi Q9M9P3.

Protocols and materials databases

DNASUi 821313.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G03250.1 ; AT3G03250.1 ; AT3G03250 .
GeneIDi 821313.
KEGGi ath:AT3G03250.

Organism-specific databases

TAIRi AT3G03250.

Phylogenomic databases

eggNOGi COG4284.
HOGENOMi HOG000113618.
InParanoidi Q9M9P3.
KOi K00963.
OMAi AIDVFSH.
PhylomeDBi Q9M9P3.

Enzyme and pathway databases

BioCyci ARA:AT3G03250-MONOMER.
MetaCyc:AT3G03250-MONOMER.
Reactomei REACT_180021. Glycogen synthesis.

Miscellaneous databases

EvolutionaryTracei Q9M9P3.

Gene expression databases

Genevestigatori Q9M9P3.

Family and domain databases

Gene3Di 3.90.550.10. 1 hit.
InterProi IPR029044. Nucleotide-diphossugar_trans.
IPR016267. UDPGP_trans.
IPR002618. UDPGP_trans_fam.
[Graphical view ]
PANTHERi PTHR11952. PTHR11952. 1 hit.
PTHR11952:SF1. PTHR11952:SF1. 1 hit.
Pfami PF01704. UDPGP. 1 hit.
[Graphical view ]
PIRSFi PIRSF000806. UDPGP. 1 hit.
SUPFAMi SSF53448. SSF53448. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features."
    Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T., Giglione C.
    Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS], CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS].
  5. "X-ray structure of gene product from Arabidopsis thaliana At3g03250, a putative UDP-glucose pyrophosphorylase."
    Center for eukaryotic structural genomics (CESG)
    Submitted (APR-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.86 ANGSTROMS) OF 1-469.

Entry informationi

Entry nameiUGPA2_ARATH
AccessioniPrimary (citable) accession number: Q9M9P3
Secondary accession number(s): Q9ASY1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 24, 2006
Last sequence update: October 1, 2000
Last modified: September 3, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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