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Q9M884 (Q9M884_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Mannose-6-phosphate isomerase EMBL AEE73831.1
Submitted name:
Putative mannose-6-phosphate isomerase EMBL AAF32464.1
Gene names
Name:F16B3.20 EMBL AAF32464.1
Synonyms:MEE31 EMBL AEE73831.1
Ordered Locus Names:At3g02570 TAIR At3g02570
ORF Names:AT3G02570 EMBL AEE73831.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAF32464.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the mannose-6-phosphate isomerase type 1 family. RuleBase RU004189

Sequences

Sequence LengthMass (Da)Tools
Q9M884 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 9BF364B9BCF8FC9B

FASTA43248,566
        10         20         30         40         50         60 
MEIATVVKAN GGCEADRRRL RRLRCSVKDY DWGKIGSDSL VYRVYAANSD YEIDPTRPYA 

        70         80         90        100        110        120 
ELWMGTHESG PSYLEDADGS NGVTLRSWIT ENPKSLGNRV LEKWGCDLPF LFKVLSVARP 

       130        140        150        160        170        180 
LSIQAHPDKK LAKKMHKAHP NLYKDDNHKP EMALAYTQFE ALCGFIPLQE LKSVIRAIPE 

       190        200        210        220        230        240 
IEELVGSEEA NQVFCITEHD EEKVKSVVRT IFTLLMSADA DTTKKIVSKL KRRLHMESQE 

       250        260        270        280        290        300 
RQLTDKERLV LKLEKQYPND IGVISAFFFN YVKLNPGEAL YLGANEPHAY LFGECLEVMA 

       310        320        330        340        350        360 
TSDNVVRAGL TSKPLDIQTL CSMLSYKLGY PEILKGTRIR PYITRYLPPF EEFEVDLCDL 

       370        380        390        400        410        420 
PSGASTVFPS VPGPSLLLVL QGEGRMSTEA SADGISMGDV LFVPADTEIH LRSSSDLKLY 

       430 
RAGINSRFLF PL

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References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. expand/collapse author list , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Full Length cDNA Clones."
Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. expand/collapse author list , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]Arabidopsis TAIR10 Release
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[6]"Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence."
Lin X., Kaul S., Town C.D., Benito M.-I., Creasy T.H., Haas B., Wu D., Ronning C.M., Koo H., Fujii C.Y., Utterback T.R., Barnstead M.E., Bowman C.L., White O., Nierman W.C., Fraser C.M.
Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC021640 Genomic DNA. Translation: AAF32464.1.
AY070447 mRNA. Translation: AAL49850.1.
AY096564 mRNA. Translation: AAM20214.1.
CP002686 Genomic DNA. Translation: AEE73831.1.
IPIIPI00521982.
RefSeqNP_186906.1. NM_111125.3.
UniGeneAt.18813.
At.24147.

3D structure databases

HSSPHSSP built from PDB template 1PMI based on UniProtKB P34948.
ProteinModelPortalQ9M884.
SMRQ9M884. Positions 17-426.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9M884. 1 interaction.
STRINGQ9M884.

Proteomic databases

PRIDEQ9M884.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G02570.1; AT3G02570.1; AT3G02570.
GeneID820656.
GenomeReviewsGene locus AT3G02570 in contig BA000014_GR.
KEGGath:AT3G02570.
NMPDRfig|3702.1.peg.12204.

Organism-specific databases

TAIRAt3g02570.

Phylogenomic databases

eggNOGKOG2757.
GeneTreeEPGT00050000007691.
HOGENOMHBG590632.
InParanoidQ9M884.
OMAGTHPSVP.
PhylomeDBQ9M884.
ProtClustDBPLN02288.

Gene expression databases

ArrayExpressQ9M884.
GenevestigatorQ9M884.

Family and domain databases

InterProIPR011051. Cupin_RmlC_type.
IPR001250. Man6P_Isoase-1.
IPR016305. Mannose-6-P_Isomerase.
IPR018050. Pmannose_isomerase-type1_CS.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
Gene3DG3DSA:2.60.120.10. RmlC-like_jellyroll. 3 hits.
KOK01809.
PANTHERPTHR10309. PTHR10309. 1 hit.
PfamPF01238. PMI_typeI. 1 hit.
[Graphical view]
PIRSFPIRSF001480. Mannose-6-phosphate_isomerase. 1 hit.
PRINTSPR00714. MAN6PISMRASE.
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
TIGRFAMsTIGR00218. ManA. 1 hit.
PROSITEPS00965. PMI_I_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9M884_ARATH
AccessionPrimary (citable) accession number: Q9M884
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info