Unreviewed, UniProtKB/TrEMBL Q9M7F5 (Q9M7F5_BOEPA)

Names and origin

Protein names	Submitted name:     Class I chitinase EMBL AAF69792.1
Organism	Boechera parishii (Dwarf rockcress) (Arabis parishii) EMBL AAF69792.1
Taxonomic identifier	81979 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Boechera

Protein attributes

Sequence length	312 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1

Ontologies

Keywords
Ligand	Chitin-binding RuleBase RU000410V1 Spearmint SPM018371
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAF69792.1
	Non-terminal residue	312	1	EMBL AAF69792.1

Sequences

	Sequence		Length	Mass (Da)
	Q9M7F5-1 [UniParc]. Last modified October 1, 2000. Version 1. Checksum: 7C6019E35F213CF1	FASTA	312	33,229
	10 20 30 40 50 60 SLLLSLASAE QCGRQAGGAL CPNGLCCSEF GWCGDTEPYC KQPGCQSQCT PGGTPPGPTP 70 80 90 100 110 120 TGDLSGIISS SQFDDMLKHR NDAACPARGF YTYNAFITAA KSFPGFGTTG DTATRKKEIA 130 140 150 160 170 180 AFFGQTSHET TGGWASAPDG PFSWGYCFKQ EQNPTSNYCE PSATWPCAPG KRYYGRGPMQ 190 200 210 220 230 240 LSWNYNYGLC GRAIGVDLLN NPDLVANDAV IAFKAAIWFW MTAQPPKPSC HAVIAGQWQP 250 260 270 280 290 300 SDADRAAGRL PGYGVITNII NGGLECGRGQ DGRVADRIGF YQRYCNIFGV NPGGNLDCYN 310 QRPFGNGLLG AA

References

[1]	"Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution." Bishop J.G., Dean A.M., Mitchell-Olds T. Proc. Natl. Acad. Sci. U.S.A. 97:5322-5327(2000) [PubMed: 10805791] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF135152 Genomic DNA. Translation: AAF69792.1.
3D structure databases
HSSP	HSSP built from PDB template 2BAA based on UniProtKB P23951.
SMR	Q9M7F5. Positions 10-304.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Family and domain databases
InterPro	IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
PANTHER	PTHR22595. Glyco_hydro_19_cat. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9M7F5_BOEPA

Accession

Primary (citable) accession number: Q9M7F5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2000
Last sequence update:	October 1, 2000
Last modified:	April 14, 2009
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)