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Protein

Arabinogalactan peptide 20

Gene

AGP20

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.

Names & Taxonomyi

Protein namesi
Recommended name:
Arabinogalactan peptide 20
Short name:
AG-peptide 20
Gene namesi
Name:AGP20
Ordered Locus Names:At3g61640
ORF Names:F15G16.30
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G61640.
TAIRilocus:2076730. AT3G61640.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
PeptideiPRO_000026902127 – 37Arabinogalactan peptide 20Add BLAST11
PropeptideiPRO_000026902238 – 74Removed in mature formSequence analysisAdd BLAST37

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei27Pyrrolidone carboxylic acidBy similarity1
Lipidationi37GPI-anchor amidated serineSequence analysis1

Post-translational modificationi

O-glycosylated on the hydroxyproline residues.By similarity

Keywords - PTMi

Glycoprotein, GPI-anchor, Lipoprotein, Proteoglycan, Pyrrolidone carboxylic acid

Proteomic databases

PaxDbiQ9M373.

Expressioni

Gene expression databases

ExpressionAtlasiQ9M373. baseline and differential.
GenevisibleiQ9M373. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G61640.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the AG-peptide AGP family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410J7R0. Eukaryota.
ENOG410Z4BH. LUCA.
HOGENOMiHOG000238140.
InParanoidiQ9M373.
OMAiMAICGSS.
OrthoDBiEOG0936116L.
PhylomeDBiQ9M373.

Family and domain databases

InterProiView protein in InterPro
IPR009424. Arabinogalactan_peptide.
PfamiView protein in Pfam
PF06376. AGP. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9M373-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRNSVAVI ALFAFVFAVI SPFAGAQSLA PAPSPTSDGT SIDQGIAYLL
60 70
MVVALVLTYL IHPLDASSSS YTFF
Length:74
Mass (Da):7,699
Last modified:October 1, 2000 - v1
Checksum:iF47D5BC7911C2C0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL132959 Genomic DNA. Translation: CAB71094.1.
CP002686 Genomic DNA. Translation: AEE80235.1.
AY084640 mRNA. Translation: AAM61203.1.
BT025563 mRNA. Translation: ABF58981.1.
PIRiT47956.
RefSeqiNP_191723.1. NM_116029.3.
UniGeneiAt.34255.

Genome annotation databases

EnsemblPlantsiAT3G61640.1; AT3G61640.1; AT3G61640.
GeneIDi825337.
GrameneiAT3G61640.1; AT3G61640.1; AT3G61640.
KEGGiath:AT3G61640.

Similar proteinsi

Entry informationi

Entry nameiAGP20_ARATH
AccessioniPrimary (citable) accession number: Q9M373
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: October 1, 2000
Last modified: April 12, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families