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Q9M329

- Q9M329_ARATH

UniProt

Q9M329 - Q9M329_ARATH

Protein
Submitted name:

At3g53980

Gene

F5K20_280

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Submitted name:
    At3g53980Imported
    Submitted name:
    Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinImported
    Submitted name:
    Putative uncharacterized protein At3g53980Imported
    Submitted name:
    Putative uncharacterized protein F5K20_280Imported
    Gene namesi
    Name:F5K20_280Imported
    Ordered Locus Names:At3g53980Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G53980.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9M329.

    Structurei

    3D structure databases

    SMRiQ9M329. Positions 32-103.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000240789.
    InParanoidiQ9M329.
    OMAiICAITIP.
    PhylomeDBiQ9M329.

    Family and domain databases

    InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
    [Graphical view]
    PfamiPF14368. LTP_2. 1 hit.
    [Graphical view]
    SMARTiSM00499. AAI. 1 hit.
    [Graphical view]
    SUPFAMiSSF47699. SSF47699. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9M329-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAASMKFLCI LGLILLIGTV VDGAGECGRS SPDNEAMKLA PCAGAAQDAN    50
    SAVPGGCCTQ IKRFSQNPKC LCAILLSDTA KASGVDPEVA LTIPKRCNFA 100
    NRPVGYKCGA YTLP 114
    Length:114
    Mass (Da):11,723
    Last modified:October 1, 2000 - v1
    Checksum:i5F4FC1F8C7FE8B34
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT002445 mRNA. Translation: AAO00805.1.
    BT006519 mRNA. Translation: AAP21327.1.
    CP002686 Genomic DNA. Translation: AEE79167.1.
    CP002686 Genomic DNA. Translation: AEE79168.1.
    AL132960 Genomic DNA. Translation: CAB88360.1.
    PIRiT45938.
    RefSeqiNP_190966.1. NM_115258.2.
    NP_850700.1. NM_180369.3.
    UniGeneiAt.1411.

    Genome annotation databases

    EnsemblPlantsiAT3G53980.1; AT3G53980.1; AT3G53980.
    AT3G53980.2; AT3G53980.2; AT3G53980.
    GeneIDi824565.
    KEGGiath:AT3G53980.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT002445 mRNA. Translation: AAO00805.1 .
    BT006519 mRNA. Translation: AAP21327.1 .
    CP002686 Genomic DNA. Translation: AEE79167.1 .
    CP002686 Genomic DNA. Translation: AEE79168.1 .
    AL132960 Genomic DNA. Translation: CAB88360.1 .
    PIRi T45938.
    RefSeqi NP_190966.1. NM_115258.2.
    NP_850700.1. NM_180369.3.
    UniGenei At.1411.

    3D structure databases

    SMRi Q9M329. Positions 32-103.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G53980.1 ; AT3G53980.1 ; AT3G53980 .
    AT3G53980.2 ; AT3G53980.2 ; AT3G53980 .
    GeneIDi 824565.
    KEGGi ath:AT3G53980.

    Organism-specific databases

    TAIRi AT3G53980.

    Phylogenomic databases

    HOGENOMi HOG000240789.
    InParanoidi Q9M329.
    OMAi ICAITIP.
    PhylomeDBi Q9M329.

    Gene expression databases

    Genevestigatori Q9M329.

    Family and domain databases

    InterProi IPR016140. Bifunc_inhib/LTP/seed_store.
    [Graphical view ]
    Pfami PF14368. LTP_2. 1 hit.
    [Graphical view ]
    SMARTi SM00499. AAI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47699. SSF47699. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Monfort A., Casacuberta E., Puigdomenech P., Mewes H.W., Rudd S., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M.
      Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
      European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
      Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
      , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    3. EU Arabidopsis sequencing project
      Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    4. Cited for: NUCLEOTIDE SEQUENCE.
    5. Cited for: NUCLEOTIDE SEQUENCE.
    6. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    7. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ9M329_ARATH
    AccessioniPrimary (citable) accession number: Q9M329
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2000
    Last sequence update: October 1, 2000
    Last modified: October 1, 2014
    This is version 84 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3