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Unreviewed, UniProtKB/TrEMBL Q9M2T6 (Q9M2T6_ARATH)

Last modified June 16, 2009. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Beta-1, 3-glucanase-like protein EMBL CAB75901.1
Gene names
Ordered Locus Names: At3g55430 TAIR At3g55430
ORF Names: T22E16.90
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335V0

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from direct assay. Source: TAIR

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9M2T6-1 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 5F9C0350DFF12147

FASTA44948,442
        10         20         30         40         50         60 
MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI 

        70         80         90        100        110        120 
FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV SVNILPFHPQ TKIKYISVGN 

       130        140        150        160        170        180 
EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG 

       190        200        210        220        230        240 
WDKGILAPIL AYHRRTKSPF MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF 

       250        260        270        280        290        300 
DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL 

       310        320        330        340        350        360 
MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS 

       370        380        390        400        410        420 
TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS CFNPSSLRTH ASFVMNAYFQ 

       430        440 
SHGRTDGACN FSGTGMIVGN NPSNGACKY 

« Hide

References

[1]Benes V., Wurmbach E., Drzonek H., Ansorge W., Mewes H.W., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]EU Arabidopsis sequencing project
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G., Yuan S., Chen H., Cheuk R., Jones T., Kim C.J. expand/collapse author list , Nguyen M., Palm C.J., Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R., Theologis A.
Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY150389 mRNA. Translation: AAN12934.1.
AL132975 Genomic DNA. Translation: CAB75901.1.
IPIIPI00544198.
PIRT47682.
RefSeqNP_191103.1.
UniGeneAt.1190
At.72017
At.72451

3D structure databases

HSSPHSSP built from PDB template 1AQ0 based on UniProtKB P12257.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PRIDEQ9M2T6.

Genome annotation databases

GeneID824709.
KEGGath:AT3G55430.
NMPDRfig|3702.1.peg.16860.

Organism-specific databases

TAIRAt3g55430.

Phylogenomic databases

OMAQ9M2T6. NRRFETY.

Family and domain databases

InterProIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_sg_catalytic.
IPR012946. X8.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9M2T6_ARATH
AccessionPrimary (citable) accession number: Q9M2T6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: June 16, 2009
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information