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Q9M2T6 (Q9M2T6_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-1, 3-glucanase-like protein EMBL CAB75901.1
Submitted name:
O-Glycosyl hydrolases family 17 protein EMBL AEE79383.1
Submitted name:
Putative beta-1,3-glucanase EMBL AAN12934.1
Gene names
Name:T22E16.90 EMBL CAB75901.1
Ordered Locus Names:At3g55430 TAIR At3g55430
ORF Names:AT3G55430 EMBL AEE79383.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAB75901.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Sequences

Sequence LengthMass (Da)Tools
Q9M2T6 [UniParc].

Last modified October 1, 2000. Version 1.
Checksum: 5F9C0350DFF12147

FASTA44948,442
        10         20         30         40         50         60 
MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI 

        70         80         90        100        110        120 
FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV SVNILPFHPQ TKIKYISVGN 

       130        140        150        160        170        180 
EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG 

       190        200        210        220        230        240 
WDKGILAPIL AYHRRTKSPF MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF 

       250        260        270        280        290        300 
DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL 

       310        320        330        340        350        360 
MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS 

       370        380        390        400        410        420 
TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS CFNPSSLRTH ASFVMNAYFQ 

       430        440 
SHGRTDGACN FSGTGMIVGN NPSNGACKY

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G., Yuan S., Chen H., Cheuk R., Jones T., Kim C.J. expand/collapse author list , Nguyen M., Palm C.J., Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R., Theologis A.
Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Arabidopsis TAIR10 Release
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[5]EU Arabidopsis sequencing project
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Benes V., Wurmbach E., Drzonek H., Ansorge W., Mewes H.W., Lemcke K., Mayer K.F.X., Quetier F., Salanoubat M.
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY150389 mRNA. Translation: AAN12934.1.
CP002686 Genomic DNA. Translation: AEE79383.1.
AL132975 Genomic DNA. Translation: CAB75901.1.
IPIIPI00544198.
PIRT47682.
RefSeqNP_191103.1. NM_115401.2.
UniGeneAt.1190.
At.72017.

3D structure databases

HSSPHSSP built from PDB template 1AQ0 based on UniProtKB P12257.
ProteinModelPortalQ9M2T6.
SMRQ9M2T6. Positions 29-343, 359-449.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PRIDEQ9M2T6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G55430.1; AT3G55430.1; AT3G55430.
GeneID824709.
KEGGath:AT3G55430.
NMPDRfig|3702.1.peg.16860.

Organism-specific databases

TAIRAt3g55430.

Phylogenomic databases

GeneTreeEPGT00050000003581.
InParanoidQ9M2T6.
OMAKPGPTAE.
PhylomeDBQ9M2T6.
ProtClustDBCLSN2915776.

Gene expression databases

GenevestigatorQ9M2T6.

Family and domain databases

InterProIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9M2T6_ARATH
AccessionPrimary (citable) accession number: Q9M2T6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: January 25, 2012
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info