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Protein
Submitted name:

Pectin lyase-like superfamily protein

Gene

T27B3.30

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAspartyl esteraseSAAS annotation, Hydrolase, LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Pectin lyase-like superfamily proteinImported
Gene namesi
Name:T27B3.30Imported
Ordered Locus Names:At3g42160Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G42160
TAIRilocus:2100804 AT3G42160

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G42160.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini116 – 149PectinesteraseInterPro annotationAdd BLAST34

Family and domain databases

Gene3Di2.160.20.10, 1 hit
InterProiView protein in InterPro
IPR012334 Pectin_lyas_fold
IPR011050 Pectin_lyase_fold/virulence
IPR000070 Pectinesterase_cat
PfamiView protein in Pfam
PF01095 Pectinesterase, 1 hit
SUPFAMiSSF51126 SSF51126, 1 hit

Sequencei

Sequence statusi: Complete.

Q9M2N6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSYYVEEEE TNLEMCLNDN YEECHGSKSP LTRDISFLGK ENYAKQGEVL
60 70 80 90 100
EYKGATMKEY NCQRLPRHEE KLDNHTLLYR GPKASRQAKP RHKFFHTNPR
110 120 130 140 150
VVQEVLQEVT QRTSMWAGPK KRQAVALRIS ADATVVYRCR INAYQDTLCC

SVS
Length:153
Mass (Da):17,797
Last modified:October 1, 2000 - v1
Checksum:iE6F1334EBE2E75CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002686 Genomic DNA Translation: AEE77727.1
AL137079 Genomic DNA Translation: CAB68117.1
PIRiT46110
RefSeqiNP_189802.1, NM_114083.1
UniGeneiAt.53652

Genome annotation databases

EnsemblPlantsiAT3G42160.1; AT3G42160.1; AT3G42160
GeneIDi823189
GrameneiAT3G42160.1; AT3G42160.1; AT3G42160
KEGGiath:AT3G42160

Entry informationi

Entry nameiQ9M2N6_ARATH
AccessioniPrimary (citable) accession number: Q9M2N6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health