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Q9M2K6 (E13L1_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glucan endo-1,3-beta-glucosidase-like protein 1
Gene names
Ordered Locus Names:At3g58100
ORF Names:F9D24.10
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length180 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Cell membrane; Lipid-anchor › GPI-anchor Ref.5.

Sequence caution

The sequence AAM67357.1 differs from that shown. Reason: Erroneous initiation.

The sequence CAB68148.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainSignal
   PTMGPI-anchor
Glycoprotein
Lipoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentanchored to plasma membrane

Inferred from direct assay. Source: TAIR

plasmodesma

Inferred from direct assay. Source: TAIR

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 157128Glucan endo-1,3-beta-glucosidase-like protein 1
PRO_0000253999
Propeptide158 – 18023Removed in mature form Potential
PRO_0000254000

Amino acid modifications

Lipidation1571GPI-anchor amidated serine Potential

Experimental info

Sequence conflict1381Missing in AAM67357. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Q9M2K6 [UniParc].

Last modified October 17, 2006. Version 2.
Checksum: E130E5961CFC78F1

FASTA18019,171
        10         20         30         40         50         60 
MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA 

        70         80         90        100        110        120 
CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE EDEACNFNNN AALTSLNPSQ 

       130        140        150        160        170        180 
GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed: 11130713] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Full-length cDNA from Arabidopsis thaliana."
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[4]"Arabidopsis ORF clones."
Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[5]"Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment."
Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S., Brodbeck U., Peck S.C., Jensen O.N.
J. Proteome Res. 5:935-943(2006) [PubMed: 16602701] [Abstract]
Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL137081 Genomic DNA. Translation: CAB68148.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE79741.1.
AY085999 mRNA. Translation: AAM67357.1. Different initiation.
BT025769 mRNA. Translation: ABF83659.1.
IPIIPI00545457.
PIRT45970.
RefSeqNP_567060.1. NM_115672.2.
UniGeneAt.34762.

3D structure databases

ProteinModelPortalQ9M2K6.
SMRQ9M2K6. Positions 39-129.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.

Proteomic databases

PRIDEQ9M2K6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G58100.1; AT3G58100.1; AT3G58100.
GeneID824979.
GenomeReviewsGene locus AT3G58100 in contig BA000014_GR.
KEGGath:AT3G58100.
NMPDRfig|3702.1.peg.17150.

Organism-specific databases

TAIRAt3g58100.

Phylogenomic databases

GeneTreeEPGT00050000003232.
HOGENOMHBG603981.
InParanoidQ9M2K6.
OMANNAEDSS.
PhylomeDBQ9M2K6.
ProtClustDBCLSN2689213.

Gene expression databases

GenevestigatorQ9M2K6.
GermOnlineAT3G58100. Arabidopsis thaliana.

Family and domain databases

InterProIPR012946. X8.
[Graphical view]
PfamPF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE13L1_ARATH
AccessionPrimary (citable) accession number: Q9M2K6
Secondary accession number(s): Q1ECG5, Q8LDH7
Entry history
Integrated into UniProtKB/Swiss-Prot: October 17, 2006
Last sequence update: October 17, 2006
Last modified: December 14, 2011
This is version 51 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents